RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CBLP22681 906 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 SERPINF1P36955 418 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 PDLIM4P50479 330 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 SNRPD2P62316 118 aaKnown RBP13.41□□□□□ -0.26
TPM3-219ENST00000509409 SWI5Q1ZZU3 235 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 MST1LQ2TV78 715 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 GCNT6Q5T4J0 391 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 LINGO2Q7L985 606 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 SLC46A3Q7Z3Q1 461 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 KRT73Q86Y46 540 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 GPR137CQ8N3F9 429 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 NANOS1Q8WY41 292 aaKnown RBP13.41□□□□□ -0.26
TPM3-219ENST00000509409 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 BOD1Q96IK1 185 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 OXGR1Q96P68 337 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 KATNB1Q9BVA0 655 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 PTDSS2Q9BVG9 487 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 SPATA5L1Q9BVQ7 753 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 LINC00470Q9BZP3 86 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 TCF7L2Q9NQB0 619 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 CCDC167Q9P0B6 97 aa13.41□□□□□ -0.26
TPM3-219ENST00000509409 A0A096LNT2 108 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 VSTM5A8MXK1 200 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 FTCDNL1E5RQL4 147 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 TGDSO95455 350 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 BMP2P12643 396 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 ETS2P15036 469 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 PRKAR1BP31321 381 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
TPM3-219ENST00000509409 ARF1P84077 181 aaKnown RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 VLDLRP98155 873 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 CDK6Q00534 326 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 EGR4Q05215 589 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 REEP3Q6NUK4 255 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 NET1Q7Z628 596 aaPredicted RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 MAGEE2Q8TD90 523 aaPredicted RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 LRRC8CQ8TDW0 803 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 DNAJA4Q8WW22 397 aaPredicted RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 SLC38A4Q969I6 547 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 TAAR8Q969N4 342 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 ZNF317Q96PQ6 595 aaPredicted RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 BEX2Q9BXY8 128 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 C12orf10Q9HB07 376 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 CA10Q9NS85 328 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 SLAMF8Q9P0V8 285 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 SEC14L4Q9UDX3 406 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 SLC13A4Q9UKG4 626 aa13.4□□□□□ -0.26
TPM3-219ENST00000509409 HEATR1Q9H583 2144 aaKnown RBP13.4□□□□□ -0.26
TPM3-219ENST00000509409 CHD3Q12873 2000 aaKnown RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 PLCE1Q9P212 2302 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 TRAV36DV7A0A075B6V5 113 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 A0A1B0GWA3 101 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 EVPLLA8MZ36 301 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 B9A039 149 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 M0R082 166 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 AKAP8O43823 692 aaKnown RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 OR4A8P0C604 315 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 CECR9P0C854 216 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 ARAFP10398 606 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 SLC6A2P23975 617 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 GRPRP30550 384 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 CAPZA2P47755 286 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 IDH3AP50213 366 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 NCALDP61601 193 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 NAAAQ02083 359 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 GGTLC2Q14390 218 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 IQCCQ4KMZ1 466 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 AGKQ53H12 422 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 ALG10BQ5I7T1 473 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 FAM69AQ5T7M9 428 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 BLOC1S3Q6QNY0 202 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 C5orf46Q6UWT4 87 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 H1FNTQ75WM6 255 aaPredicted RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 FUNDC1Q8IVP5 155 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 OR4F15Q8NGB8 312 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 ZNF417Q8TAU3 575 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 SLC47A1Q96FL8 570 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 C7orf26Q96N11 449 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 ZNF607Q96SK3 696 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 ZNF587Q96SQ5 575 aaPredicted RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 PIMREGQ9BSJ6 248 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 TMEM27Q9HBJ8 222 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 SLC25A37Q9NYZ2 338 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.39□□□□□ -0.27
TPM3-219ENST00000509409 CDC42EP3Q9UKI2 254 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 RCE1Q9Y256 329 aa13.39□□□□□ -0.27
TPM3-219ENST00000509409 FBN1P35555 2871 aaKnown RBP13.38□□□□□ -0.27
TPM3-219ENST00000509409 TPST1O60507 370 aa13.38□□□□□ -0.27
TPM3-219ENST00000509409 IGHV4-31P0DP07 118 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms