RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 PVALBP20472 110 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ITGA3P26006 1051 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 EFNA3P52797 238 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 HSD17B7P56937 341 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 PSPHP78330 225 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 RBBP4Q09028 425 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 NDUFAF6Q330K2 333 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 C9orf152Q5JTZ5 239 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 DBX2Q6ZNG2 339 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 RNF165Q6ZSG1 346 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 COX15Q7KZN9 410 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC29A4Q7RTT9 530 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 GPR155Q7Z3F1 870 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 OR52N2Q8NGI0 321 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC38A5Q8WUX1 472 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ACOT12Q8WYK0 555 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 KIAA1143Q96AT1 154 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 NUDT9Q9BW91 350 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 DEFB126Q9BYW3 111 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 LANCL2Q9NS86 450 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ACSS1Q9NUB1 689 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 MRTO4Q9UKD2 239 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 A8MVJ9 347 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 DISC1C4P0D8 188 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 NPIPB8E9PQR5 432 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC16A6O15403 523 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ITPKBP27987 946 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 CCKBRP32239 447 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 TBCEQ15813 527 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF791Q3KP31 576 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 FAAP20Q6NZ36 180 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 C9orf62Q8N4C0 152 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 BMPERQ8N8U9 685 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 OR8J3Q8NGG0 315 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 APH1BQ8WW43 257 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC35A4Q96G79 324 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 TSNAXQ99598 290 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 PIP5K1AQ99755 562 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 CMSS1Q9BQ75 279 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 FUZQ9BT04 418 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 RBFOX1Q9NWB1 397 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 P2RX2Q9UBL9 471 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 KLK13Q9UKR3 277 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 FARSAQ9Y285 508 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 V9GYH0 126 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 CACNA1BQ00975 2339 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 NSG1A0A0A6YYJ2 146 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 M0R3H8 397 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ALPPP05187 535 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 FGF5P12034 268 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 PPIBP23284 216 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 IL12BP29460 328 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 RPS5P46782 204 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ANXA11P50995 505 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 B2MP61769 119 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 SERTAD2Q14140 314 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 PTGES3Q15185 160 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 SSX1Q16384 188 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 SYT9Q86SS6 491 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 VRK2Q86Y07 508 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF454Q8N9F8 522 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 OR8D4Q8NGM9 314 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF671Q8TAW3 534 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 MVB12AQ96EY5 273 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 LRRC46Q96FV0 321 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 MS4A4EQ96PG1 132 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 WDR77Q9BQA1 342 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 SCNM1Q9BWG6 230 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 CACNG6Q9BXT2 260 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ACTRT3Q9BYD9 372 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 NXF5Q9H1B4 397 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 RPS6KA6Q9UK32 745 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 HSPE1-MOB4S4R3N1 261 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ACACBO00763 2458 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 C17orf51A8MQB3 221 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 HMGN4O00479 90 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 PEX12O00623 359 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 KLK10O43240 276 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 ECDO95905 644 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 F12P00748 615 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 GKN3PP0CG01 181 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 CEACAM1P13688 526 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 AKR1C3P42330 323 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 HAAOP46952 286 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 KCNJ3P48549 501 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 PRICKLE4Q2TBC4 344 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 MFSD12Q6NUT3 480 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 HSDL2Q6YN16 418 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 LINC00696Q6ZRV3 163 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 FGD2Q7Z6J4 655 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 SERPINA12Q8IW75 414 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 NEIL3Q8TAT5 605 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 NXPE2Q96DL1 559 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 OR51J1Q9H342 316 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 FOLH1BQ9HBA9 442 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 Q9N2J8 555 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 NPAP1Q9NZP6 1156 aa7.94□□□□□ -1.14
LIMCH1-209ENST00000509277 KLK4Q9Y5K2 254 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms