RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 NPAP1Q9NZP6 1156 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 RCE1Q9Y256 329 aa16.39■□□□□ 0.21
UBE3D-207ENST00000509102 A0A1W2PR80 420 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 M0R082 166 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 MRASO14807 208 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 LGI1O95970 557 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 OPN1SWP03999 348 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 INHBBP09529 407 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 GRPRP30550 384 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 SELENOPP49908 381 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 GUCY1A3Q02108 690 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 KLF10Q13118 480 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 NANOGP8Q6NSW7 305 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 HMBOX1Q6NT76 420 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 ZNF613Q6PF04 617 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 COMTD1Q86VU5 262 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 OR8J3Q8NGG0 315 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 LILRB1Q8NHL6 650 aaPredicted RBP16.38■□□□□ 0.21
UBE3D-207ENST00000509102 ZNF417Q8TAU3 575 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 TAAR8Q969N4 342 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 LRRC58Q96CX6 371 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 ZNF587Q96SQ5 575 aaPredicted RBP16.38■□□□□ 0.21
UBE3D-207ENST00000509102 NANOGQ9H9S0 305 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 FKRPQ9H9S5 495 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 OBP2BQ9NPH6 170 aa16.38■□□□□ 0.21
UBE3D-207ENST00000509102 SETD2Q9BYW2 2564 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 PRR14LQ5THK1 2151 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ACANP16112 2415 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 M0R3H8 397 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 SLC43A1O75387 559 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 IFNA14P01570 189 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 CD40P25942 277 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 FOXG1P55316 489 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 SH3BGRP55822 239 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 CLDN17P56750 224 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 UBE2NP61088 152 aaKnown RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 SF3A3Q12874 501 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ETFDHQ16134 617 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 DUSP7Q16829 419 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 VMACQ2NL98 169 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 AGAP6Q5VW22 663 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ERICH5Q6P6B1 374 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 LSRQ86X29 649 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 EPHX4Q8IUS5 362 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 UEVLDQ8IX04 471 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 GPR137CQ8N3F9 429 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ADPRHL1Q8NDY3 354 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 IGFBPL1Q8WX77 278 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 PROX1Q92786 737 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 NEUROG1Q92886 237 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ZNF317Q96PQ6 595 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 ARHGDIGQ99819 225 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 TMEM43Q9BTV4 400 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 PRR14Q9BWN1 585 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 LINC00470Q9BZP3 86 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 CCDC134Q9H6E4 229 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 MOV10Q9HCE1 1003 aaKnown RBP16.37■□□□□ 0.21
UBE3D-207ENST00000509102 SAR1AQ9NR31 198 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 KLHL14Q9P2G3 628 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
UBE3D-207ENST00000509102 IGKV1D-42A0A075B6H8 117 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 SHISA9B4DS77 424 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 FBP2O00757 339 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 SLC22A2O15244 555 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 CHP2O43745 196 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 SOD3P08294 240 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 DANCRP0C864 163 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 CBLP22681 906 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 CDH12P55289 794 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 NRF1Q16656 503 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 REP15Q6BDI9 236 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 KDM8Q8N371 416 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 SCAIQ8N9R8 606 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 PIK3C3Q8NEB9 887 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 VANGL1Q8TAA9 524 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-207ENST00000509102 KCNS3Q9BQ31 491 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 C1QTNF6Q9BXI9 259 aa16.36■□□□□ 0.21
UBE3D-207ENST00000509102 RSPO3Q9BXY4 272 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-207ENST00000509102 LOC102725191A0A1B0GVB3 256 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 FZD7O75084 574 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 MT-ATP6P00846 226 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 CD247P20963 164 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 PMS2P3Q13401 168 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 ENTPD8Q5MY95 495 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 TTC33Q6PID6 262 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-207ENST00000509102 SNX32Q86XE0 403 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 FBXL14Q8N1E6 418 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 WDR31Q8NA23 367 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 ANKK1Q8NFD2 765 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 OR6T1Q8NGN1 323 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 DHRS9Q9BPW9 319 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 SEC14L4Q9UDX3 406 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 BAG5Q9UL15 447 aa16.35■□□□□ 0.21
UBE3D-207ENST00000509102 LOC100653049A0A140TA62 436 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 TRAPPC13A5PLN9 417 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 CPSF4LA6NMK7 179 aaKnown RBP16.34■□□□□ 0.21
UBE3D-207ENST00000509102 H7C1Q1 480 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 KRT34O76011 436 aa16.34■□□□□ 0.21
UBE3D-207ENST00000509102 OR6A2O95222 327 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms