RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 GAPDHP04406 335 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 UBTFL1P0CB47 393 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 SLC35E2P0CK97 266 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 GCFC2P16383 781 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ATP6V1B2P21281 511 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 OTX1P32242 354 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 GSSP48637 474 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 BCL2L1Q07817 233 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ASAH1Q13510 395 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 DPYSL3Q14195 570 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 GNMTQ14749 295 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 MARCH8Q5T0T0 291 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 PIP5KL1Q5T9C9 394 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 MARC1Q5VT66 337 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 METTL11BQ5VVY1 283 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLCXD3Q63HM9 321 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 GDPD3Q7L5L3 318 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF571Q7Z3V5 609 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 C9orf40Q8IXQ3 194 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 GABRG1Q8N1C3 465 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 FTMTQ8N4E7 242 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 TPRX1Q8N7U7 411 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 B3GNT7Q8NFL0 401 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR4K14Q8NGD5 310 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 GPR151Q8TDV0 419 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 PAQR8Q8TEZ7 354 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 PYROXD1Q8WU10 500 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ANKRD49Q8WVL7 239 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ISG20Q96AZ6 181 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 TGS1Q96RS0 853 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 MBOAT4Q96T53 435 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 BCL7BQ9BQE9 202 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF670Q9BS34 389 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ACTR6Q9GZN1 396 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 NIPAL2Q9H841 368 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 MIEF1Q9NQG6 463 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 DHRS4-AS1Q9P1J3 65 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 SPRR3Q9UBC9 169 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 RIMS3Q9UJD0 308 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 VANGL2Q9ULK5 521 aa3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF256Q9Y2P7 627 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 CHTOPQ9Y3Y2 248 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-209ENST00000508304 USP47Q96K76 1375 aa3.09□□□□□ -1.92
TRAPPC13-209ENST00000508304 A0A1B0GWB2 263 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 TEX46H3BTG2 121 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 WWP2O00308 870 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 CHMP2AO43633 222 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 SOX15O60248 233 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 TBL1XO60907 577 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 ZNF254O75437 659 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 CTAG2O75638 210 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 KBTBD11O94819 623 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 LY6G6DO95868 133 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 IGHG4P01861 327 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 S100A9P06702 114 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 OR8U8P0C7N1 319 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 CCDC166P0CW27 439 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 RBMY1CP0DJD4 496 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 MYL2P10916 166 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 IGHV1-2P23083 117 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 UGT1A3P35503 534 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 RAB9AP51151 201 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 BCAP31P51572 246 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 KPNA2P52292 529 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 BIDP55957 195 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 MRPS22P82650 360 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 TLE4Q04727 773 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 MRPL23Q16540 153 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 QRICH1Q2TAL8 776 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 PRR30Q53SZ7 412 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 C9orf135Q5VTT2 229 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 C2orf66Q6UXQ4 117 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 ZNF600Q6ZNG1 722 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 ACOT7LQ6ZUV0 252 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 VRK2Q86Y07 508 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 SVOPLQ8N434 492 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 OR56B4Q8NH76 319 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 KIFAP3Q92845 792 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 ZIM3Q96PE6 472 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 NAT9Q9BTE0 207 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 MFFQ9GZY8 342 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 DNTTIP1Q9H147 329 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 BLZF1Q9H2G9 400 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 LZTFL1Q9NQ48 299 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 LYARQ9NX58 379 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 TREM2Q9NZC2 230 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 KCNIP1Q9NZI2 227 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 OR1A1Q9P1Q5 309 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 STAP1Q9ULZ2 295 aa3.08□□□□□ -1.92
TRAPPC13-209ENST00000508304 A0A1W2PPE3 182 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 DCTN6O00399 190 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 PES1O00541 588 aaKnown RBP3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 DLGAP1O14490 977 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 GOSR2O14653 212 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 HSD17B6O14756 317 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 MBTPS2O43462 519 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 AKR7A2O43488 359 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 LYPD3O95274 346 aa3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 FGFR1OPO95684 399 aaKnown RBP3.07□□□□□ -1.92
TRAPPC13-209ENST00000508304 CCDC172P0C7W6 258 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms