RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SOD1P00441 154 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 F11P03951 625 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 LIPFP07098 398 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 BCKDHAP12694 445 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 GABRA5P31644 462 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 VIPR1P32241 457 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 KHKP50053 298 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 POLR2JP52435 117 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 UBE2G2P60604 165 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 DYNLT1P63172 113 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 EFNB1P98172 346 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 IL24Q13007 206 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 OR5I1Q13606 314 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 TMEM132DQ14C87 1099 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 SMIM21Q3B7S5 101 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 C2orf76Q3KRA6 126 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 COA6Q5JTJ3 125 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 ATG9BQ674R7 924 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 MRNIPQ6NTE8 343 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 TMEM108Q6UXF1 575 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 ASB18Q6ZVZ8 466 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 CILP2Q8IUL8 1156 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 C9orf40Q8IXQ3 194 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 SELENOHQ8IZQ5 122 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 FBXO39Q8N4B4 442 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 C11orf42Q8N5U0 333 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 MITD1Q8WV92 249 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 NUDCD2Q8WVJ2 157 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 FAM162AQ96A26 154 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 OR8B4Q96RC9 309 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 CMKLR1Q99788 373 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 SYT17Q9BSW7 474 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 GSTO2Q9H4Y5 243 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 FXYD6-FXYD2A0A087WZ82 144 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BKO60814 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 GRAP2O75791 330 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 UBL3O95164 117 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 METTL18O95568 372 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 TBX18O95935 607 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HPRT1P00492 218 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 CD8AP01732 235 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BJP06899 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 UMODP07911 640 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 SFTA3P0C7M3 94 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 ITGB5P18084 799 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BOP23527 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BBP33778 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 AVPR1BP47901 424 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 ZNF84P51523 738 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BDP58876 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 RPL7AP62424 266 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 PPP2CBP62714 309 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BCP62807 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 PPP2CAP67775 309 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 NKX6-1P78426 367 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 DOC2BQ14184 412 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 CCDC85BQ15834 202 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST2H2BEQ16778 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 UBXN11Q5T124 520 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 C9orf135Q5VTT2 229 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 GGNBP1Q5YKI7 109 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 USP17L2Q6R6M4 530 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 TMEM270Q6UE05 265 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 ZNF836Q6ZNA1 936 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 FAM83HQ6ZRV2 1179 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 CALHM3Q86XJ0 350 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 SLC30A7Q8NEW0 376 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 OR5M8Q8NGP6 311 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HAVCR2Q8TDQ0 301 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 THAP3Q8WTV1 239 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 THEM6Q8WUY1 208 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 EDAQ92838 391 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BHQ93079 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 PLA2G12BQ9BX93 195 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 FXYD6Q9H0Q3 95 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 ATXN3LQ9H3M9 355 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 RPS10P5Q9NQ39 176 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 RAD18Q9NS91 495 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 MS4A12Q9NXJ0 267 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.82
PDLIM5-210ENST00000508216 BRCA1P38398 1863 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 PRAMEF27A3QJZ7 478 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 PRAMEF25A6NGN4 478 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 F5H423 210 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 F8VVB4 439 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 F8VWA3 439 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 PRAMEF4O60810 478 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 FBXO24O75426 580 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 CD74P04233 296 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 CST2P09228 141 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 ACRP10323 421 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 HOXB2P14652 356 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 ELK1P19419 428 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 UBE2V2Q15819 145 aa9.95□□□□□ -0.82
PDLIM5-210ENST00000508216 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms