RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 IMPA2O14732 288 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ARPC3O15145 178 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ARPC5O15511 151 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 XRCC3O43542 346 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 NDUFA2O43678 99 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 BRINP1O60477 761 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 CDC40O60508 579 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 GMDSO60547 372 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 CTNSO60931 367 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 CDC123O75794 336 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 FGF18O76093 207 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 GLCEO94923 617 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 GLSO94925 669 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR2F2O95006 317 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 LYPD3O95274 346 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 CXCL14O95715 111 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PMS2P2O95744 297 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 IGF2P01344 180 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 HRGP04196 525 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RLN1P04808 185 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PCCBP05166 539 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RHOP08100 348 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SYPP08247 313 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 MELTFP08582 738 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 AKAIN1P0CW23 69 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 APEHP13798 732 aaKnown RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRKACAP17612 351 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 CFPP27918 469 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 HTR2AP28223 471 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RPL4P36578 427 aaKnown RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 EIF1AXP47813 144 aaKnown RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PTH2RP49190 550 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 STARP49675 285 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC25A1P53007 311 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRMT2P55345 433 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 FXYD6P3P58550 94 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 TAS2R20P59543 309 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRPS1P60891 318 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RPS11P62280 158 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PPP2CBP62714 309 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PPP2CAP67775 309 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 NTHL1P78549 312 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 S100A12P80511 92 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RASGEF1BQ0VAM2 473 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SCRN3Q0VDG4 424 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 DBPQ10586 325 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR2F1Q13607 317 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 CBFBQ13951 182 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF345Q14585 488 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 TCEA2Q15560 299 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RPE65Q16518 533 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 GPR162Q16538 588 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 DUSP5Q16690 384 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF750Q32MQ0 723 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 LINC00303Q3SY05 128 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 Q499Y3 187 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 EXOSC6Q5RKV6 272 aaKnown RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 HES5Q5TA89 166 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PLPP4Q5VZY2 271 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF425Q6IV72 752 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PWWP2BQ6NUJ5 590 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ULK3Q6PHR2 472 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 C11orf88Q6PI97 169 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 TSSK4Q6SA08 328 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 IGF2-ASQ6U949 168 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SHISA2Q6UWI4 295 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 DNM1P46Q6ZS02 220 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ABHD13Q7L211 337 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 FCRLAQ7L513 359 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC16A9Q7RTY1 509 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRSS45Q7RTY3 260 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 DEFB128Q7Z7B8 93 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 JAZF1Q86VZ6 243 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF440Q8IYI8 595 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 IZUMO1Q8IYV9 350 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF433Q8N7K0 673 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 AMER3Q8N944 861 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 LINC01555Q8NAE3 123 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 PXT1Q8NFP0 134 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR2AK2Q8NG84 335 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR4D9Q8NGE8 314 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR52E1Q8NGJ3 308 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR52E2Q8NGJ4 325 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR51A7Q8NH64 312 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR5AK2Q8NH90 309 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RPS4Y2Q8TD47 263 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OIT3Q8WWZ8 545 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RIT1Q92963 219 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZG16BQ96DA0 208 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC25A38Q96DW6 304 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 RSPRY1Q96DX4 576 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZMYND19Q96E35 227 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SCLYQ96I15 445 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 C10orf90Q96M02 699 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 HSPA12BQ96MM6 686 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 DERL3Q96Q80 235 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR14A2Q96R54 314 aa4.55□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC25A21Q9BQT8 299 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms