RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZNF813Q6ZN06 617 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF600Q6ZNG1 722 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF765Q7L2R6 523 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 ARL11Q969Q4 196 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 C16orf58Q96GQ5 468 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 GFI1Q99684 422 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 PRSS16Q9NQE7 514 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 KCNE3Q9Y6H6 103 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 GPR31O00270 319 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 FGF16O43320 207 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 ELFN1P0C7U0 828 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 MAKP20794 623 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 CSF2RBP32927 897 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF136P52737 540 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 UBE2IP63279 158 aaKnown RBP14.59□□□□□ -0.07
SCLT1-208ENST00000506368 CXADRP78310 365 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 TOMM20Q15388 145 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 C2orf68Q2NKX9 166 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 C4orf46Q504U0 113 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 ENPP7Q6UWV6 458 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 FRRS1Q6ZNA5 592 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 Q6ZVU0 165 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SSX6Q7RTT6 188 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 TAS1R1Q7RTX1 841 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SLC35F2Q8IXU6 374 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 DND1Q8IYX4 353 aaKnown RBP14.59□□□□□ -0.07
SCLT1-208ENST00000506368 THRSPQ92748 146 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 GCDHQ92947 438 aaPredicted RBP14.59□□□□□ -0.07
SCLT1-208ENST00000506368 BPIFA2Q96DR5 249 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SLC22A12Q96S37 553 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 PTDSS2Q9BVG9 487 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 POTEKPQ9BYX7 375 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 RNF122Q9H9V4 155 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 PCDHB10Q9UN67 800 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 TMEM272A0A1B0GTI8 110 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM200CA6NKL6 621 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 MCIDASD6RGH6 385 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 PIN1P1O15428 100 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ERAL1O75616 437 aaKnown RBP14.58□□□□□ -0.08
SCLT1-208ENST00000506368 NTN1O95631 604 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 EFEMP2O95967 443 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ITGB2P05107 769 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 EPHB3P54753 998 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ACTBP60709 375 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ACTG1P63261 375 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 EEF1A1P68104 462 aaKnown RBP14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ARHGAP11BQ3KRB8 267 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 MANEAQ5SRI9 462 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 MRM1Q6IN84 353 aaKnown RBP14.58□□□□□ -0.08
SCLT1-208ENST00000506368 C11orf87Q6NUJ2 197 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 SLC48A1Q6P1K1 146 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF836Q6ZNA1 936 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 NDUFAF7Q7L592 441 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.58□□□□□ -0.08
SCLT1-208ENST00000506368 RAB42Q8N4Z0 105 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 OR5M8Q8NGP6 311 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 PMM1Q92871 262 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 ZG16BQ96DA0 208 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 PEX11GQ96HA9 241 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 OR52A5Q9H2C5 316 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM185BQ9H7F4 350 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 TCF7L1Q9HCS4 588 aa14.58□□□□□ -0.08
SCLT1-208ENST00000506368 A0A1B0GTI1 187 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 GXYLT2A0PJZ3 443 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 OR5H14A6NHG9 310 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 EPOPA6NHQ4 379 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 VEGFDO43915 354 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF432O94892 652 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 SPP1P10451 314 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ACHEP22303 614 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 S100PP25815 95 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 NDUFS1P28331 727 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 LUMP51884 338 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 OC90Q02509 493 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 AMZ1Q400G9 498 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 NKAPLQ5M9Q1 402 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 FAAP20Q6NZ36 180 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 IL34Q6ZMJ4 242 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 CCDC116Q8IYX3 515 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF433Q8N7K0 673 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 STOML3Q8TAV4 291 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 OTUB2Q96DC9 234 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 CNRIP1Q96F85 164 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 DTD2Q96FN9 168 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 EXO5Q9H790 373 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 SLC17A5Q9NRA2 495 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF107Q9UII5 783 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 MSRAQ9UJ68 235 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 MKL2Q9ULH7 1088 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 WDR45Q9Y484 360 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 RNF222A6NCQ9 220 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 OR6C74A6NCV1 312 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 LRIT2A6NDA9 550 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 LINC01387J3KSC0 135 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 OR1F1O43749 312 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 DBIP07108 87 aaKnown RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 HLA-GP17693 338 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms