RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 TNIP2Q8NFZ5 429 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 CNOT9Q92600 299 aaKnown RBP5.33□□□□□ -1.56
SCLT1-207ENST00000506233 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 NODALQ96S42 347 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 ZBTB18Q99592 522 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 NEURL2Q9BR09 285 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 SLC30A2Q9BRI3 323 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 RAB11FIP5Q9BXF6 653 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 POLDIP3Q9BY77 421 aaKnown RBP5.33□□□□□ -1.56
SCLT1-207ENST00000506233 MTIF3Q9H2K0 278 aaKnown RBP5.33□□□□□ -1.56
SCLT1-207ENST00000506233 ZCCHC4Q9H5U6 513 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 SLC35D1Q9NTN3 355 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 NDUFB11Q9NX14 153 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 PTGFRNQ9P2B2 879 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 CARD8Q9Y2G2 431 aa5.33□□□□□ -1.56
SCLT1-207ENST00000506233 ZNF99A8MXY4 864 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 FAM25EA8MYX2 175 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LRRN3E7EW58 273 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LMO7DNF2Z398 122 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 CHST10O43529 356 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SCAF4O95104 1147 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ADAP00813 363 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DCNP07585 359 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 UQCRC1P31930 480 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RPS19P39019 145 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 MAGEA8P43361 318 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DHPSP49366 369 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RAB38P57729 211 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 OR1D5P58170 312 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ESRRGP62508 458 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SHC2P98077 582 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ACSM1Q08AH1 577 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 AIMP2Q13155 320 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 FAM214AQ32MH5 1076 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LYPD4Q6UWN0 246 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 CFAP77Q6ZQR2 320 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 CLVS1Q8IUQ0 354 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 NHLRC2Q8NBF2 726 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 OR6Q1Q8NGQ2 317 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LCN9Q8WX39 176 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RAB40AQ8WXH6 277 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 STARD8Q92502 1023 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 UBE2E3Q969T4 207 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 COL21A1Q96P44 957 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ZNF347Q96SE7 839 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 STACQ99469 402 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LRRN3Q9H3W5 708 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 PLK3Q9H4B4 646 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RIBC2Q9H4K1 309 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DUSP22Q9NRW4 184 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LYARQ9NX58 379 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RAB23Q9ULC3 237 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SNX7Q9UNH6 387 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 IFT52Q9Y366 437 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 KIR2DS5A0A0G2JLQ3 304 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 A0A0G2JNG1 304 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 A0A1W2PPC1 479 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 VSTM2BA6NLU5 285 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 CDRT15L2A8MXV6 281 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 KIR2DS3K7RE56 304 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DCTN6O00399 190 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SOCS6O14544 535 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ZBTB11O95625 1053 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 GPR75O95800 540 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 FOSL2P15408 326 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DNASE1P24855 282 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SOX3P41225 446 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 KIR2DL2P43627 348 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RFX2P48378 723 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 XKP51811 444 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 NR0B1P51843 470 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 PRKAG1P54619 331 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 PRR5P85299 388 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 HHEXQ03014 270 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 RUNX1T1Q06455 604 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 KIR2DS5Q14953 304 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 TOMM34Q15785 309 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 COL28A1Q2UY09 1125 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 CXorf66Q5JRM2 361 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DCST2Q5T1A1 773 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 B3GLCTQ6Y288 498 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 TMPRSS11FQ6ZWK6 438 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 MBOAT2Q6ZWT7 520 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 CCDC190Q86UF4 302 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 FAM9CQ8IZT9 166 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 LRRC25Q8N386 305 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 TTLQ8NG68 377 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 C16orf52Q8NHV5 167 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 C2CD4CQ8TF44 421 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ZBED6CLQ96FA7 236 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 MS4A4EQ96PG1 132 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SRMSQ9H3Y6 488 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 DYRK4Q9NR20 520 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ATAD3AQ9NVI7 634 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ABI3Q9P2A4 366 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SERTAD3Q9UJW9 196 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 PSME2Q9UL46 239 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 POFUT2Q9Y2G5 429 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 A0A0G2JNJ9 132 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 GADD45GO95257 159 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms