RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 RBMY1A1P0DJD3 496 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PF4V1P10720 104 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GFAPP14136 432 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NCF1P14598 390 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF250P15622 560 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 CSNK2A2P19784 350 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 UQCRC2P22695 453 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 EPHA3P29320 983 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 CRABP2P29373 138 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TYK2P29597 1187 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SSTR1P30872 391 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MAP3K8P41279 467 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MAGEA4P43358 317 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SERPINB9P50453 376 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MMP15P51511 669 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 UBE2NP61088 152 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ERVS71-1P61550 626 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GNB2P62879 340 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MRPS25P82663 173 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF117Q03924 483 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NPRL3Q12980 569 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF460Q14592 562 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SLC17A1Q14916 467 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TSNQ15631 228 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PDK4Q16654 411 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TSTQ16762 297 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 KCTD19Q17RG1 926 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 FAM83EQ2M2I3 478 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GLIPR1L2Q4G1C9 344 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MSS51Q4VC12 460 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PAGE2BQ5JRK9 111 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TEDDM1Q5T9Z0 273 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GRTP1Q5TC63 336 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TRMT10BQ6PF06 316 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF841Q6ZN19 808 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 Q6ZS46 218 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TMPPEQ6ZT21 453 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 C3orf62Q6ZUJ4 267 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MYLK4Q86YV6 388 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 IFT20Q8IY31 132 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 KLHL36Q8N4N3 616 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SPICQ8N5J4 248 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF283Q8N7M2 679 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SPERTQ8NA61 448 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 IL17RDQ8NFM7 739 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 OR4C13Q8NGP0 309 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 OR9A2Q8NGT5 310 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GPR119Q8TDV5 335 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 IFT81Q8WYA0 676 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 HOXB13Q92826 284 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ESAMQ96AP7 390 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TMEM45BQ96B21 275 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ERP27Q96DN0 273 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 CCDC126Q96EE4 140 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ELMOD3Q96FG2 381 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PDLIM5Q96HC4 596 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 AJUBAQ96IF1 538 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF385AQ96PM9 386 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ALKBH3Q96Q83 286 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 OR5B2Q96R09 309 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PAFAH2Q99487 392 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 DDOQ99489 341 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GPR22Q99680 433 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NABP2Q9BQ15 211 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NUDT16L1Q9BRJ7 211 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PCGF1Q9BSM1 259 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 EFCAB11Q9BUY7 163 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GPR61Q9BZJ8 451 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TRIM15Q9C019 465 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 DERL2Q9GZP9 239 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 IQCGQ9H095 443 aaKnown RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZMAT4Q9H898 229 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PPCSQ9HAB8 311 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 WDR41Q9HAD4 459 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NMRAL1Q9HBL8 299 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GRHL1Q9NZI5 618 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF224Q9NZL3 707 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 CD274Q9NZQ7 290 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 TAAR3PQ9P1P4 343 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PSMC3IPQ9P2W1 217 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 UPB1Q9UBR1 384 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 DUSP13Q9UII6 198 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SCOCQ9UIL1 159 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 VWA7Q9Y334 891 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 OR10H1Q9Y4A9 318 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 OARD1Q9Y530 152 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MAB21L2Q9Y586 359 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ANGPTL3Q9Y5C1 460 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 SMAD5-AS1Q9Y6J3 95 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ZSCAN5BA6NJL1 495 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 AQP7P3A6NL99 342 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 MYO1GB0I1T2 1018 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF879B4DU55 563 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 SLC25A17O43808 307 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 CCNT2O60583 730 aaKnown RBP2.7□□□□□ -1.98
TCOF1-208ENST00000506063 DNAJA2O60884 412 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 SMIM24O75264 130 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 CRCPO75575 148 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 UPK3AO75631 287 aa2.7□□□□□ -1.98
TCOF1-208ENST00000506063 FCN3O75636 299 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms