RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 ARAFP10398 606 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 RPS5P46782 204 aaKnown RBP19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 TMEM249Q2WGJ8 235 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 C3orf36Q3SXR2 165 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 AGBL2Q5U5Z8 902 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 NIPAL3Q6P499 406 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 KLHL24Q6TFL4 600 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 FAM169BQ8N8A8 192 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 ANKK1Q8NFD2 765 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 C10orf105Q8TEF2 133 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 SLC25A36Q96CQ1 311 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 EBF4Q9BQW3 602 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 SLCO1B3Q9NPD5 702 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 SEC14L4Q9UDX3 406 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 PMF1-BGLAPU3KQ54 211 aa19.33■□□□□ 0.68
SUDS3P1-201ENST00000505831 TPST1O60507 370 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 ERLIN1O75477 346 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 KRT33AO76009 404 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 IGLV1-44P01699 117 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 BMP4P12644 408 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 HOXB1P14653 301 aaPredicted RBP19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 SLC25A16P16260 332 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 HTR2AP28223 471 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 PAGE3Q5JUK9 113 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 ANKRD16Q6P6B7 361 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 DHRS4L2Q6PKH6 230 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 CXXC5Q7LFL8 322 aaKnown RBP19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 TAAR8Q969N4 342 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 OXGR1Q96P68 337 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 ALKBH3Q96Q83 286 aaPredicted RBP19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 SLC38A2Q96QD8 506 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 CCDC28BQ9BUN5 200 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 CACYBPQ9HB71 228 aaKnown RBP19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 VAPAQ9P0L0 249 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 RCE1Q9Y256 329 aa19.32■□□□□ 0.68
SUDS3P1-201ENST00000505831 IGKV1D-42A0A075B6H8 117 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 A0A1B0GWA3 101 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 A8MV72 311 aaPredicted RBP19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 NR5A2O00482 541 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 OR2T1O43869 369 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 GPX2P18283 190 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 STX1BP61266 288 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 VLDLRP98155 873 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 REEP3Q6NUK4 255 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 C5orf46Q6UWT4 87 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 SPATA3Q8NHX4 192 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 NFKBIDQ8NI38 313 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 FAM168AQ92567 244 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 PROX1Q92786 737 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 SPDL1Q96EA4 605 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 KATNB1Q9BVA0 655 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 PRR14Q9BWN1 585 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 CCDC167Q9P0B6 97 aa19.31■□□□□ 0.68
SUDS3P1-201ENST00000505831 C5orf58C9J3I9 102 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 POLR3GO15318 223 aaPredicted RBP19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 LY6HO94772 140 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 ZNF43P17038 809 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 SH3BGRP55822 239 aaPredicted RBP19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 CLDN17P56750 224 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 CDK6Q00534 326 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 ROR2Q01974 943 aaKnown RBP19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 ADRM1Q16186 407 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 GLIPR1L2Q4G1C9 344 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 C6orf52Q5T4I8 152 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 FAM69AQ5T7M9 428 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 NHLRC1Q6VVB1 395 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 NET1Q7Z628 596 aaPredicted RBP19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 DNAJA4Q8WW22 397 aaPredicted RBP19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 SLC38A4Q969I6 547 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 IKZF5Q9H5V7 419 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 TMEM38AQ9H6F2 299 aa19.3■□□□□ 0.68
SUDS3P1-201ENST00000505831 VWC2LB2RUY7 222 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 IGKV3-15P01624 115 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 CSF3P09919 207 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 PPIBP23284 216 aaKnown RBP19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 UBE2NP61088 152 aaKnown RBP19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 NAAAQ02083 359 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 GCNT6Q5T4J0 391 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 HMBOX1Q6NT76 420 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 H1FNTQ75WM6 255 aaPredicted RBP19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 FBXO17Q96EF6 278 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 ZNF837Q96EG3 531 aaPredicted RBP19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 SLC41A3Q96GZ6 507 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 CA10Q9NS85 328 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 RPS6KB2Q9UBS0 482 aa19.29■□□□□ 0.68
SUDS3P1-201ENST00000505831 A0A096LPE4 126 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 A0A1W2PPZ6 126 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 MS4A18H0YCH9 400 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 M0R082 166 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 AIM2O14862 343 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 TPST2O60704 377 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 CRYAAP02489 173 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 CECR9P0C854 216 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 SERPINF1P36955 418 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 TUBA1BP68363 451 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 TUBA4AP68366 448 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 ARF1P84077 181 aaKnown RBP19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 MS4A18Q3C1V0 323 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 FAM91A1Q658Y4 838 aa19.28■□□□□ 0.68
SUDS3P1-201ENST00000505831 ULK3Q6PHR2 472 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms