RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 XKR7Q5GH72 579 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MRPL2Q5T653 305 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 AVPI1Q5T686 147 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 TREML4Q6UXN2 200 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 C1orf229Q6ZS94 237 aaPredicted RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ZCCHC23Q6ZST2 131 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 USP43Q70EL4 1123 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MDP1Q86V88 176 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 C4orf33Q8N1A6 199 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 KDM8Q8N371 416 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 NOA1Q8NC60 698 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 RDH5Q92781 318 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 YIPF5Q969M3 257 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 TUBGCP3Q96CW5 907 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 PPP1R36Q96LQ0 422 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF747Q9BV97 191 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF696Q9H7X3 374 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 EXOSC3Q9NQT5 275 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 POLE3Q9NRF9 147 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF275Q9NSD4 429 aaPredicted RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 DDX28Q9NUL7 540 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MID2Q9UJV3 735 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CORINQ9Y5Q5 1042 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 NOX1Q9Y5S8 564 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MGAM2Q2M2H8 2515 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 SVEP1Q4LDE5 3571 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 A0A0G2JK05 382 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 A0A0G2JMP0 313 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 A0A0X1KG70 313 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 COPEO14579 308 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 FRS3O43559 492 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 TRIM13O60858 407 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 NCR1O76036 304 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 AHSA1O95433 338 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 HLA-HP01893 362 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 C1QCP02747 245 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 GKN3PP0CG01 181 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 NAT2P11245 290 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 CD79AP11912 226 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 IL7RP16871 459 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ACHEP22303 614 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 PAX7P23759 505 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 CXCR1P25024 350 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 GTF2E2P29084 291 aaKnown RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ARR3P36575 388 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 CCT5P48643 541 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 SH3BGRP55822 239 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 LMO4P61968 165 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 PIGFQ07326 219 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZP4Q12836 540 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 EPS8Q12929 822 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 FOXL1Q12952 345 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 CEACAM16Q2WEN9 425 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 C3orf36Q3SXR2 165 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 SLC9B1Q4ZJI4 515 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 C6orf136Q5SQH8 315 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 GKAP1Q5VSY0 366 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 CARD17Q5XLA6 110 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ATG16L1Q676U5 607 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 RNF165Q6ZSG1 346 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 CREB3L2Q70SY1 520 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 TRMT10CQ7L0Y3 403 aaKnown RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 C1QL2Q7Z5L3 287 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 EPHX4Q8IUS5 362 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 RIBC1Q8N443 379 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 TEX29Q8N6K0 151 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ANKFN1Q8N957 763 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZDHHC22Q8N966 263 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 OR4M2Q8NGB6 313 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 MAGEE2Q8TD90 523 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 SLC25A36Q96CQ1 311 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF837Q96EG3 531 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 BOD1Q96IK1 185 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 C3orf30Q96M34 536 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF317Q96PQ6 595 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 MECRQ9BV79 373 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF416Q9BWM5 594 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 C1QTNF5Q9BXJ0 243 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 TMPRSS13Q9BYE2 586 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 DPY30Q9C005 99 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 RACGAP1Q9H0H5 632 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 MOV10Q9HCE1 1003 aaKnown RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 RLIMQ9NVW2 624 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 MYEF2Q9P2K5 600 aaKnown RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 MARCOQ9UEW3 520 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 ZDHHC2Q9UIJ5 367 aa5.92□□□□□ -1.46
NPIPB3-203ENST00000504841 PRAMEF27A3QJZ7 478 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 AGAP5A6NIR3 686 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 A8MVM7 634 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 M0R3G1 203 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 RNASET2O00584 256 aaKnown RBP5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 TPD52L2O43399 206 aaKnown RBP5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 PLPP2O43688 288 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 SLC43A1O75387 559 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 PNMTP11086 282 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF43P17038 809 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 KRT4P19013 534 aa5.91□□□□□ -1.46
NPIPB3-203ENST00000504841 NCF2P19878 526 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms