RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 OSGIN2Q9Y236 505 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FLVCR1Q9Y5Y0 555 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PTPN13Q12923 2485 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NPIPB13A6NJU9 1138 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NPIPB4C9JG80 1138 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PDLIM1O00151 329 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SULT2B1O00204 365 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TNFRSF11BO00300 401 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 KPNA4O00629 521 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CASQ2O14958 399 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 HNRNPRO43390 633 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OR2T1O43869 369 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SS18L1O75177 396 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GMNNO75496 209 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OR7A10O76100 309 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CH25HO95992 272 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 LDLRP01130 860 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ALPLP05186 524 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TPOP07202 933 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 IGFBP1P08833 259 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 HOXD4P09016 255 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 IFI30P13284 250 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PRKACGP22612 351 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FPR3P25089 353 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 AGTR1P30556 359 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 DNAJA1P31689 397 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GPR4P46093 362 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 EIF1AXP47813 144 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 DAPP51397 102 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CARD18P57730 90 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 EFNB1P98172 346 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SPIBQ01892 262 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SRYQ05066 204 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TSPAN31Q12999 210 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OR7A5Q15622 319 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 HIST3H3Q16695 136 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ARMC4Q5T2S8 1044 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 WLSQ5T9L3 541 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZFP1Q6P2D0 407 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 VWA1Q6PCB0 445 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SHQ1Q6PI26 577 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TTC33Q6PID6 262 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 KLHL17Q6TDP4 642 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 B3GNT6Q6ZMB0 384 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FCRLAQ7L513 359 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 AMIGO2Q86SJ2 522 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TMEM123Q8N131 208 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PQLC1Q8N2U9 271 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 KDM8Q8N371 416 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MEIOBQ8N635 442 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ATP6V1C2Q8NEY4 427 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OR13C2Q8NGS9 318 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MOSPD2Q8NHP6 518 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NRG4Q8WWG1 115 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SMPDL3BQ92485 455 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 STARD4Q96DR4 205 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 DTNBP1Q96EV8 351 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CENPNQ96H22 339 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FAM46AQ96IP4 442 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF385AQ96PM9 386 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FEVQ99581 238 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SF3B5Q9BWJ5 86 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OSBPL10Q9BXB5 764 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MRPL13Q9BYD1 178 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GP6Q9HCN6 339 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NRIP3Q9NQ35 241 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PAQR5Q9NXK6 330 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ALKBH4Q9NXW9 302 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 KLHL13Q9P2N7 655 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FOXD3Q9UJU5 478 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CAMK2AQ9UQM7 478 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 B3GALT5Q9Y2C3 310 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MED31Q9Y3C7 131 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SAMHD1Q9Y3Z3 626 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SPIN1Q9Y657 262 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ICE1Q9Y2F5 2266 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TRAV27A0A087WT01 109 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 SLC22A20A6NK97 555 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 FIGNL2A6NMB9 653 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 GJE1A6NN92 205 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF724A8MTY0 619 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 MCIDASD6RGH6 385 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 H0Y3Z8 333 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 BHLHE40O14503 412 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 PRRG2O14669 202 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 EIF1BO60739 113 aaKnown RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 DEAF1O75398 565 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 AHSA1O95433 338 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 IGHMP01871 453 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ABOP16442 354 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 FASP25445 335 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 SLC9A3P48764 834 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF133P52736 654 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 FOXG1P55316 489 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 CSNK2A1P68400 391 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-208ENST00000504788 SLC35A1P78382 337 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 RUNX1T1Q06455 604 aa4.38□□□□□ -1.71
LMNB1-208ENST00000504788 RPL18Q07020 188 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms