RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LYPD3O95274 346 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 ABCA1O95477 2261 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 THY1P04216 161 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 NCF2P19878 526 aaPredicted RBP12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 PTAFRP25105 342 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 RPS5P46782 204 aaKnown RBP12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF83P51522 516 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 CDH11P55287 796 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 FAM91A1Q658Y4 838 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 LINC00114Q6XXX2 140 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 AAED1Q7RTV5 226 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 DHDDSQ86SQ9 333 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 KDM8Q8N371 416 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 POMGNT2Q8NAT1 580 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 OR4D11Q8NGI4 311 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 TSPEARQ8WU66 669 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 SLC38A4Q969I6 547 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 CGREF1Q99674 301 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 ARMC7Q9H6L4 198 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 KAT8Q9H7Z6 458 aaKnown RBP12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 SAR1AQ9NR31 198 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 MRGBPQ9NV56 204 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 TESQ9UGI8 421 aaKnown RBP12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 LEF1Q9UJU2 399 aaPredicted RBP12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 RASD1Q9Y272 281 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 RRP15Q9Y3B9 282 aaKnown RBP12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 CUBNO60494 3623 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 ABCA2Q9BZC7 2435 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 A0A087WUJ7 227 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 LOC102725191A0A1B0GVB3 256 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 CIB4A0PJX0 185 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 C5orf58C9J3I9 102 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 FXYD1O00168 92 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 TRAF3IP2O43734 574 aaPredicted RBP12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 HPRP00739 348 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 BGLAPP02818 100 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 AQP1P29972 269 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 MTPNP58546 118 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 TNK1Q13470 666 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 NRF1Q16656 503 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 DUSP7Q16829 419 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 C1QTNF12Q5T7M4 302 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 GPAT4Q86UL3 456 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 FITM2Q8N6M3 262 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 HIPK4Q8NE63 616 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 RADILQ96JH8 1075 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 ARHGDIGQ99819 225 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 TAPBPLQ9BX59 468 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 LINC00470Q9BZP3 86 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 GDF2Q9UK05 429 aaPredicted RBP12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 TRIM33Q9UPN9 1127 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 CORO2BQ9UQ03 480 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 B3GALT5Q9Y2C3 310 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 HIVEP2P31629 2446 aa12.23□□□□□ -0.45
PDLIM7-211ENST00000504318 MS4A18H0YCH9 400 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 M0R082 166 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 UBOX5O94941 541 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 AHSA1O95433 338 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 LGI1O95970 557 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 CD247P20963 164 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 PTNP21246 168 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 SLC6A2P23975 617 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 TTKP33981 857 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 RASSF2P50749 326 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 BNIP1Q12981 228 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 OR1Q1Q15612 314 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 MS4A18Q3C1V0 323 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 HIKESHIQ53FT3 197 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 ALG10BQ5I7T1 473 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 METTL21CQ5VZV1 264 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 TMEM225Q6GV28 225 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 C5orf46Q6UWT4 87 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 TMEM108Q6UXF1 575 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 WDR88Q6ZMY6 472 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 TMEM123Q8N131 208 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 ADPRHL1Q8NDY3 354 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF417Q8TAU3 575 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 DNAJA4Q8WW22 397 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 BCL2L2Q92843 193 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF837Q96EG3 531 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 ALKBH3Q96Q83 286 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF587Q96SQ5 575 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 DHRS9Q9BPW9 319 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 SPATA5L1Q9BVQ7 753 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 C1QTNF6Q9BXI9 259 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 MYLK2Q9H1R3 596 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 CRNNQ9UBG3 495 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 UPB1Q9UBR1 384 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 MGAT4BQ9UQ53 548 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 RCE1Q9Y256 329 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 AMDHD2Q9Y303 409 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 NDUFAF1Q9Y375 327 aa12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 SONP18583 2426 aaKnown RBP12.22□□□□□ -0.45
PDLIM7-211ENST00000504318 TRAV36DV7A0A075B6V5 113 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms