RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MGARPQ8TDB4 240 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 DDIT4LQ96D03 193 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 MARS2Q96GW9 593 aaKnown RBP10.55□□□□□ -0.72
LSM6-204ENST00000504181 EGLN2Q96KS0 407 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 SF3B5Q9BWJ5 86 aaKnown RBP10.55□□□□□ -0.72
LSM6-204ENST00000504181 ZCCHC3Q9NUD5 404 aaKnown RBP10.55□□□□□ -0.72
LSM6-204ENST00000504181 SIRT5Q9NXA8 310 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
LSM6-204ENST00000504181 CSMD3Q7Z407 3707 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 TMEM72A0PK05 275 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 TP73O15350 636 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 GPR137BO60478 399 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 HLA-HP01893 362 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 CD79AP11912 226 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 ZNF14P17017 642 aaPredicted RBP10.54□□□□□ -0.72
LSM6-204ENST00000504181 FKBP2P26885 142 aaKnown RBP10.54□□□□□ -0.72
LSM6-204ENST00000504181 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
LSM6-204ENST00000504181 PAX8Q06710 450 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 CD69Q07108 199 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 PIGFQ07326 219 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 LCP2Q13094 533 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 RASA2Q15283 850 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 GPR68Q15743 365 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 DEFB121Q5J5C9 76 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 MROH9Q5TGP6 573 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 FOXB2Q5VYV0 432 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 CCDC91Q7Z6B0 441 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 DYRK2Q92630 601 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 UPRTQ96BW1 309 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
LSM6-204ENST00000504181 FAM120BQ96EK7 910 aaKnown RBP10.54□□□□□ -0.72
LSM6-204ENST00000504181 ELMOD3Q96FG2 381 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 DIRC2Q96SL1 478 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 LINC00470Q9BZP3 86 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 IQCGQ9H095 443 aaKnown RBP10.54□□□□□ -0.72
LSM6-204ENST00000504181 NPHS2Q9NP85 383 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 NKIRAS2Q9NYR9 191 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 GPR160Q9UJ42 338 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 KCNE5Q9UJ90 142 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 TMCO1Q9UM00 188 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 PCDHGB4Q9UN71 923 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 PCDHGB5Q9Y5G0 923 aa10.54□□□□□ -0.72
LSM6-204ENST00000504181 DNAH1Q9P2D7 4330 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 TMED7-TICAM2A0A0A6YYA0 188 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 ZC3H12DA2A288 527 aaKnown RBP10.53□□□□□ -0.72
LSM6-204ENST00000504181 BCAS1O75363 584 aaPredicted RBP10.53□□□□□ -0.72
LSM6-204ENST00000504181 SEC31AO94979 1220 aaKnown RBP10.53□□□□□ -0.72
LSM6-204ENST00000504181 FUT4P22083 530 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 ZNF75DP51815 510 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
LSM6-204ENST00000504181 CLCQ05315 142 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 CEACAM7Q14002 265 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 OR7A5Q15622 319 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 GSG1Q2KHT4 349 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 CEACAM16Q2WEN9 425 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 TMEM225Q6GV28 225 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 RGS7BPQ6MZT1 257 aaPredicted RBP10.53□□□□□ -0.72
LSM6-204ENST00000504181 Q6ZSV7 163 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 CREB3L2Q70SY1 520 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 OLIG3Q7RTU3 272 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 ADAMTS15Q8TE58 950 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 PBKQ96KB5 322 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 NOX4Q9NPH5 578 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 B3GNT2Q9NY97 397 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 OR5V1Q9UGF6 321 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 EGFL7Q9UHF1 273 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 TMED7Q9Y3B3 224 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 TIMM22Q9Y584 194 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 POMT1Q9Y6A1 747 aa10.53□□□□□ -0.72
LSM6-204ENST00000504181 FAM187AA6NFU0 413 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 AQP7P3A6NL99 342 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 A8MXK9 166 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 RPL36A-HNRNPH2H7BZ11 118 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 URI1O94763 535 aaPredicted RBP10.52□□□□□ -0.73
LSM6-204ENST00000504181 SBK2P0C263 348 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 PPIAL4GP0DN37 164 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 HSD17B3P37058 310 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 SLC6A9P48067 706 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 SELENOVP59797 346 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 GLO1Q04760 184 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 EGR3Q06889 387 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 PRAMEF8Q5VWM4 474 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 PRAMEF7Q5VXH5 474 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 NOXRED1Q6NXP6 359 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 C3orf62Q6ZUJ4 267 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 CMIPQ8IY22 773 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 C1orf174Q8IYL3 243 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 MRRFQ96E11 262 aaKnown RBP10.52□□□□□ -0.73
LSM6-204ENST00000504181 ZNF75AQ96N20 296 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 KCNA7Q96RP8 456 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 ACTRT3Q9BYD9 372 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 OR51B6Q9H340 312 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 TOR3AQ9H497 397 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 PIF1Q9H611 641 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.73
LSM6-204ENST00000504181 GPR35Q9HC97 309 aa10.52□□□□□ -0.73
LSM6-204ENST00000504181 SLC7A8Q9UHI5 535 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms