RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 LILRA3Q8N6C8 439 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 OR6T1Q8NGN1 323 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 NXPE3Q969Y0 559 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 OR51B6Q9H340 312 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 GPR160Q9UJ42 338 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 TSPAN11A1L157 253 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 CSO75390 466 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 UBL3O95164 117 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 AFF3P51826 1226 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 CLDN17P56750 224 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 HYAL4Q2M3T9 481 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SYT6Q5T7P8 510 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC35D2Q76EJ3 337 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 OR52N1Q8NH53 320 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 CENPOQ9BU64 300 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 PRDM9Q9NQV7 894 aa15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 YARS2Q9Y2Z4 477 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC5A10A0PJK1 596 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 H7C1C5 153 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 GABARAPO95166 117 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 MTHFD2P13995 350 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 PSMB1P20618 241 aaKnown RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 LCN6P62502 163 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 RTN4RL1Q86UN2 441 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 OR52I1Q8NGK6 324 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 PSMF1Q92530 271 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 TEX37Q96LM6 180 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 NIPAL2Q9H841 368 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 LYRM4Q9HD34 91 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 ACKR4Q9NPB9 350 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SNX11Q9Y5W9 270 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM82A0PJX8 343 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF136P52737 540 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 RAB4BP61018 213 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SNRPGP62308 76 aaKnown RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC14A1Q13336 389 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 AAED1Q7RTV5 226 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 DPY19L4Q7Z388 723 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF546Q86UE3 836 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 EGFL6Q8IUX8 553 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SMAP2Q8WU79 429 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM106AQ96A25 262 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 RAB39BQ96DA2 213 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 STACQ99469 402 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SSX3Q99909 188 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 RBFOX1Q9NWB1 397 aaKnown RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 NPAP1Q9NZP6 1156 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 PHIPQ8WWQ0 1821 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 TNFRSF10CO14798 259 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 JUNBP17275 347 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 GDNFP39905 211 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF684Q5T5D7 378 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 CNEP1R1Q8N9A8 125 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 OLIG1Q8TAK6 271 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 HLA-CQ95604 372 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SAV1Q9H4B6 383 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC22A23A1A5C7 686 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 PLPP1O14494 284 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SURF4O15260 269 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 NFYAP23511 347 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 PEA15Q15121 130 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 LGALS14Q8TCE9 139 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM59Q9BXS4 323 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 OBP2BQ9NPH6 170 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 FGF21Q9NSA1 209 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 CAMK2AQ9UQM7 478 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 TRHRP34981 398 aaPredicted RBP15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC35D3Q5M8T2 416 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 DLEU7Q6UYE1 221 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 LRRC18Q8N456 261 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 KCNG3Q8TAE7 436 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 SPHK1Q9NYA1 384 aa15.3■□□□□ 0.04
PCDHA1-203ENST00000504120 LINC01553A4QN01 128 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 AGPAT2O15120 278 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 YKT6O15498 198 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 MAKP20794 623 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 SHC1P29353 583 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 GAB1Q13480 694 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 LRRC26Q2I0M4 334 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 YIF1BQ5BJH7 314 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF610Q8N9Z0 462 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 OR13C9Q8NGT0 318 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 OR6C1Q96RD1 312 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 TAS2R16Q9NYV7 291 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 CITO14578 2027 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 A0A1W2PS29 197 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 SOCS6O14544 535 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 AP1G1O43747 822 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 CD14P08571 375 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 FCGR2AP12318 317 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 CHATP28329 748 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 EIF1P41567 113 aaKnown RBP15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 MTCP1P56278 107 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 POU4F3Q15319 338 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 MSMO1Q15800 293 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 B3GLCTQ6Y288 498 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF836Q6ZNA1 936 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms