RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ZNF221Q9UK13 617 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 GMPPBQ9Y5P6 360 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 COL4A4P53420 1690 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 FRMPD4Q14CM0 1322 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 INSRP06213 1382 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGLV3-10A0A075B6K4 115 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGHV3-35A0A0C4DH35 117 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 GSTTP1A0A1W2PQM5 241 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 SAGE2PA6NJ88 616 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR6C65A6NJZ3 312 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAM220BPB1ANY3 271 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 WWP2O00308 870 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLOCKO15516 846 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 LATO43561 262 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF254O75437 659 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR2J3O76001 311 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLPXO76031 633 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 AP2A1O95782 977 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMEM50AO95807 157 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 F10P00742 488 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 S100A6P06703 90 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 TPM3P06753 285 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLTAP09496 248 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ALOX5P09917 674 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 KRTAP1-4P0C5Y4 121 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF3P17036 446 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCNOP22674 350 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGHV1-2P23083 117 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ATP5A1P25705 553 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 GTF2E2P29084 291 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 PRDX3P30048 256 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 RORAP35398 523 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 BDKRB1P46663 353 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 GNPDA1P46926 289 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 UQCRFS1P47985 274 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 RFX3P48380 749 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD47Q08722 323 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAB40BQ12829 278 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 KLRB1Q12918 225 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLAQ13239 276 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ILKQ13418 452 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 GRB7Q14451 532 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ANGPT1Q15389 498 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 VPS26BQ4G0F5 336 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 PAN3Q58A45 887 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 DCST2Q5T1A1 773 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 UTF1Q5T230 341 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 C9orf135Q5VTT2 229 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC22A10Q63ZE4 541 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR8G2PQ6IF36 304 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 H3F3CQ6NXT2 135 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAHD2BQ6P2I3 314 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 UQCC3Q6UW78 93 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 LRRC74BQ6ZQY2 392 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 IFNEQ86WN2 208 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRIM69Q86WT6 500 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ERO1BQ86YB8 467 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD302Q8IX05 232 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 C9orf40Q8IXQ3 194 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZBED8Q8IZ13 594 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ST13P4Q8IZP2 240 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAM9CQ8IZT9 166 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 FBXL16Q8N461 479 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 C15orf54Q8N8G6 183 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ASCC1Q8N9N2 400 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMEM104Q8NE00 496 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 SDR9C7Q8NEX9 313 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR2L3Q8NG85 312 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR5L2Q8NGL0 311 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 NDNFQ8TB73 568 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CNIH3Q8TBE1 160 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 MARCH1Q8TCQ1 289 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 MRAPQ8TCY5 172 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 MAGEE2Q8TD90 523 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 DTX3LQ8TDB6 740 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 GPR151Q8TDV0 419 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ACMSDQ8TDX5 336 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ADAMTS16Q8TE57 1224 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 AENQ8WTP8 325 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 PDCD6IPQ8WUM4 868 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ARNTL2Q8WYA1 636 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 BADQ92934 168 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ITFG2Q969R8 447 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAHD2AQ96GK7 314 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 TIMD4Q96H15 378 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 C12orf42Q96LP6 360 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAM210AQ96ND0 272 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRNT1Q96Q11 434 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLCC1Q96S66 551 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 P2RY13Q9BPV8 354 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 NIPSNAP3BQ9BS92 247 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 DEFB126Q9BYW3 111 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 GAL3ST2Q9H3Q3 398 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 IKZF5Q9H5V7 419 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 RANBP3Q9H6Z4 567 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 NHEJ1Q9H9Q4 299 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 POPDC2Q9HBU9 364 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 LYRM4Q9HD34 91 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ADAP2Q9NPF8 381 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 NANSQ9NR45 359 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms