RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 A0A096LPI6 279 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 OR6C65A6NJZ3 312 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 VSTM5A8MXK1 200 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 NR5A2O00482 541 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 FRS3O43559 492 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 SNNO75324 88 aaPredicted RBP9.36□□□□□ -0.91
SNCA-207ENST00000502987 ZNF43P17038 809 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 USF1P22415 310 aaPredicted RBP9.36□□□□□ -0.91
SNCA-207ENST00000502987 SERPINF1P36955 418 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 RPS5P46782 204 aaKnown RBP9.36□□□□□ -0.91
SNCA-207ENST00000502987 PDLIM4P50479 330 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 CLDN17P56750 224 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 TUBA1BP68363 451 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 TUBA4AP68366 448 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 HOXC5Q00444 222 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 C1DQ13901 141 aaKnown RBP9.36□□□□□ -0.91
SNCA-207ENST00000502987 MAPK11Q15759 364 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 TBRG1Q3YBR2 411 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 GTDC1Q4AE62 458 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 IQCCQ4KMZ1 466 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 TNFAIP8L3Q5GJ75 292 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 RNF220Q5VTB9 566 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 TUBA1AQ71U36 451 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 SERPINA11Q86U17 422 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 MIER2Q8N344 545 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 OR1K1Q8NGR3 316 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 STK35Q8TDR2 534 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 TMEM158Q8WZ71 300 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 VPS33AQ96AX1 596 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 ALKBH3Q96Q83 286 aaPredicted RBP9.36□□□□□ -0.91
SNCA-207ENST00000502987 SLC38A2Q96QD8 506 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 SHARPINQ9H0F6 387 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 RAD21L1Q9H4I0 556 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 PIF1Q9H611 641 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 OBP2BQ9NPH6 170 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 ZIM2Q9NZV7 527 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
SNCA-207ENST00000502987 CUBNO60494 3623 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 IGHV1-18A0A0C4DH31 117 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 CLIC1O00299 241 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 SLC43A1O75387 559 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 UPK3AO75631 287 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 ZCCHC18P0CG32 403 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 FAM157CP0CG43 387 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 CBLP22681 906 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 PAX7P23759 505 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 CAPZA2P47755 286 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 MVDP53602 400 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 STX1BP61266 288 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
SNCA-207ENST00000502987 VLDLRP98155 873 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 ROR2Q01974 943 aaKnown RBP9.35□□□□□ -0.91
SNCA-207ENST00000502987 ANKRD16Q6P6B7 361 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 MSANTD1Q6ZTZ1 278 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 GPR137CQ8N3F9 429 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 OR9I1Q8NGQ6 314 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 MFSD8Q8NHS3 518 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 BCL2L2Q92843 193 aaPredicted RBP9.35□□□□□ -0.91
SNCA-207ENST00000502987 OR52B2Q96RD2 323 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 PIMREGQ9BSJ6 248 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 SELENONQ9NZV5 590 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 RAB21Q9UL25 225 aa9.35□□□□□ -0.91
SNCA-207ENST00000502987 DSPPQ9NZW4 1301 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 LOC100289279A0A1B0GTE1 492 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 B9A039 149 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 LMX1BO60663 402 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 OR4A8P0C604 315 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 PNMTP11086 282 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 ZNF16P17020 682 aaPredicted RBP9.34□□□□□ -0.91
SNCA-207ENST00000502987 GZMKP49863 264 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 ARF1P84077 181 aaKnown RBP9.34□□□□□ -0.91
SNCA-207ENST00000502987 RGNQ15493 299 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 KRT73Q86Y46 540 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 EPHX4Q8IUS5 362 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 GOLGA6L1Q8N7Z2 621 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 ANKS4BQ8N8V4 417 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 BBS10Q8TAM1 723 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 MAL2Q969L2 176 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 KTI12Q96EK9 354 aaPredicted RBP9.34□□□□□ -0.91
SNCA-207ENST00000502987 FOXN4Q96NZ1 517 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 OXGR1Q96P68 337 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 SORCS2Q96PQ0 1159 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 KATNB1Q9BVA0 655 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 SDR39U1Q9NRG7 319 aaPredicted RBP9.34□□□□□ -0.91
SNCA-207ENST00000502987 CA10Q9NS85 328 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 LPAR3Q9UBY5 353 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 SLC13A4Q9UKG4 626 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 KCNS2Q9ULS6 477 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 PCDHB14Q9Y5E9 798 aa9.34□□□□□ -0.91
SNCA-207ENST00000502987 A0A096LNT2 108 aa9.33□□□□□ -0.92
SNCA-207ENST00000502987 SH3PXD2BA1X283 911 aa9.33□□□□□ -0.92
SNCA-207ENST00000502987 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
SNCA-207ENST00000502987 NDUFS8O00217 210 aa9.33□□□□□ -0.92
SNCA-207ENST00000502987 AIM2O14862 343 aa9.33□□□□□ -0.92
SNCA-207ENST00000502987 POLR3GO15318 223 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms