RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 NPR2P20594 1047 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 COMPP49747 757 aaPredicted RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SELENOPP49908 381 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 CDH15P55291 814 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 EGR4Q05215 589 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 FADDQ13158 208 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 GGTLC2Q14390 218 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 OR7A5Q15622 319 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 CHI3L2Q15782 390 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 PDCD2Q16342 344 aaPredicted RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 HIKESHIQ53FT3 197 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 FAM69AQ5T7M9 428 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 FAM91A1Q658Y4 838 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF836Q6ZNA1 936 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 OLIG3Q7RTU3 272 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC46A3Q7Z3Q1 461 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SNX32Q86XE0 403 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ARIH2OSQ8N7S6 290 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SCAIQ8N9R8 606 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 PIK3C3Q8NEB9 887 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC38A5Q8WUX1 472 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 DNAJA4Q8WW22 397 aaPredicted RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 C3orf49Q96BT1 292 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC41A3Q96GZ6 507 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 MAELQ96JY0 434 aaKnown RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 TEX37Q96LM6 180 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 FOXN4Q96NZ1 517 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 OXGR1Q96P68 337 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 OR52E6Q96RD3 313 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 PTDSS2Q9BVG9 487 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 RAD21L1Q9H4I0 556 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF385DQ9H6B1 395 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 B3GNT2Q9NY97 397 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ZIM2Q9NZV7 527 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 B3GAT1Q9P2W7 334 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEFF2Q9UIK5 374 aaPredicted RBP5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF232Q9UNY5 417 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 USP22Q9UPT9 525 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 CHST2Q9Y4C5 530 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 CORINQ9Y5Q5 1042 aa5.29□□□□□ -1.56
LSM3P4-201ENST00000502948 IGHV2OR16-5A0A0B4J2B6 119 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM129A0AVI4 362 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM247A6NEH6 219 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF99A8MXY4 864 aaPredicted RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 B4DSR2 109 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SDHDO14521 159 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 RFXANKO14593 260 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 AIM2O14862 343 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 HDAC3O15379 428 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SYNGR3O43761 229 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SNNO75324 88 aaPredicted RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC43A1O75387 559 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 UPK3AO75631 287 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 AHSA1O95433 338 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 LGI1O95970 557 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 TGFAP01135 160 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 IGFBP1P08833 259 aaPredicted RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF35P13682 527 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 DAOP14920 347 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ACHEP22303 614 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 NR4A1P22736 598 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 IL12AP29459 219 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 CALCRP30988 508 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 PRKAR1BP31321 381 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 GLRXP35754 106 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM33P57088 247 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 DSTNP60981 165 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 UFM1P61960 85 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ROR2Q01974 943 aaKnown RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 HGFACQ04756 655 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 STX3Q13277 289 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 CR1LQ2VPA4 569 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 NRN1LQ496H8 165 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SWT1Q5T5J6 900 aaKnown RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 NIPAL3Q6P499 406 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 NHLRC1Q6VVB1 395 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF621Q6ZSS3 439 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 USP43Q70EL4 1123 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 LINGO2Q7L985 606 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 GPAT4Q86UL3 456 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM123Q8N131 208 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 UBASH3BQ8TF42 649 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 HTRA1Q92743 480 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC38A4Q969I6 547 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF75AQ96N20 296 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ALKBH3Q96Q83 286 aaPredicted RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ZBTB18Q99592 522 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 VRK1Q99986 396 aaPredicted RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 C1QTNF6Q9BXI9 259 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 NUF2Q9BZD4 464 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 RACGAP1Q9H0H5 632 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 RMND5AQ9H871 391 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 TPT1P8Q9HAU6 139 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 SDR39U1Q9NRG7 319 aaPredicted RBP5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 THAP1Q9NVV9 213 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ADPRHL2Q9NX46 363 aa5.28□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF443Q9Y2A4 671 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms