RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 APMAPQ9HDC9 416 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 NPIPA5A0A0B4J1W7 369 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 C13orf42A0A1B0GVH6 325 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 NPIPA7E9PJI5 369 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 J3QRE1 110 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 WRBO00258 174 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 THY1P04216 161 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 NPIPA8P0DM63 369 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 APEHP13798 732 aaKnown RBP12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 IL9P15248 144 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 Q3ZCU0 254 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 CST9Q5W186 159 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 PWWP2BQ6NUJ5 590 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 USP50Q70EL3 339 aaPredicted RBP12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 SLC29A4Q7RTT9 530 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 CMTM8Q8IZV2 173 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 PPP1R1CQ8WVI7 109 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 HS6ST2Q96MM7 605 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 AMDHD1Q96NU7 426 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 C20orf24Q9BUV8 137 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 ST6GALNAC2Q9UJ37 374 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 PMS2P1A4D2B8 440 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 SELLP14151 372 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 ABCD3P28288 659 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 MAPK8P45983 427 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 TMEM115Q12893 351 aaPredicted RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 AIMP2Q13155 320 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 ELAVL1Q15717 326 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 OR4E2Q8NGC2 313 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 OR52E2Q8NGJ4 325 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 OR9A1PQ8NGU1 263 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 NAA11Q9BSU3 229 aaPredicted RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 ZMAT3Q9HA38 289 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 ATG4BQ9Y4P1 393 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 PIN1P1O15428 100 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 GATCO43716 136 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 CKBP12277 381 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 DAOP14920 347 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 CD34P28906 385 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 MC3RP41968 323 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 NKPD1Q17RQ9 610 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 OR52W1Q6IF63 320 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 OR1J2Q8NGS2 313 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 PLEKHA1Q9HB21 404 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 KRCC1Q9NPI7 259 aaPredicted RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 OR51B4Q9Y5P0 310 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 MAN2B1O00754 1011 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 PRKAR2AP13861 404 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF3P17036 446 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 DPP4P27487 766 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 ADH6P28332 368 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 SKP2Q13309 424 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 GFOD2Q3B7J2 385 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 RHOUQ7L0Q8 258 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 NUDT13Q86X67 352 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 SETD7Q8WTS6 366 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 UBE2E3Q969T4 207 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 GFI1Q99684 422 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 XKR8Q9H6D3 395 aa12.01□□□□□ -0.49
GAPVD1-220ENST00000497580 EIF4E2O60573 245 aaKnown RBP12□□□□□ -0.49
GAPVD1-220ENST00000497580 RPN2P04844 631 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 CD2P06729 351 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 SNRNP70P08621 437 aaKnown RBP12□□□□□ -0.49
GAPVD1-220ENST00000497580 PRKXP51817 358 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 PDX1P52945 283 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 IL10RAQ13651 578 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 C21orf62-AS1Q17RA5 79 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 ADAM5Q6NVV9 412 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 UQCC3Q6UW78 93 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 C17orf64Q86WR6 236 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 OR7D2Q96RA2 312 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 OR2AG1Q9H205 316 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 TMEM82A0PJX8 343 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 CPED1A4D0V7 1026 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 CLN5O75503 358 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 OR4E1P0C645 316 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 TYRP1P17643 537 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 PCBP4P57723 403 aaKnown RBP12□□□□□ -0.49
GAPVD1-220ENST00000497580 TAS2R38P59533 333 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 LTBQ06643 244 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 DECR1Q16698 335 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 AMZ1Q400G9 498 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 PGAP1Q75T13 922 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 OVCH1Q7RTY7 1134 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 KCNRGQ8N5I3 272 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 S100PBPQ96BU1 408 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 UQCC1Q9NVA1 299 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 A6NLC8 198 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 AMY2AP04746 511 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 CD63P08962 238 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 NME1P15531 152 aaKnown RBP12□□□□□ -0.49
GAPVD1-220ENST00000497580 ST6GAL1P15907 406 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 ABOP16442 354 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 VAMP1P23763 118 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms