RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 EBF4Q9BQW3 602 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 CCDC167Q9P0B6 97 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 SLAMF8Q9P0V8 285 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 PMF1-BGLAPU3KQ54 211 aa11.3□□□□□ -0.6
FN1-226ENST00000496542 A0A096LNT2 108 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 A8MV72 311 aaPredicted RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 M0R082 166 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 LY6HO94772 140 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 TGDSO95455 350 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 SLC25A16P16260 332 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 ZNF43P17038 809 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 PPIBP23284 216 aaKnown RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 PRKAR1BP31321 381 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 IDH3AP50213 366 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 EFNA4P52798 201 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 NCALDP61601 193 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 CDK6Q00534 326 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 ROR2Q01974 943 aaKnown RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 C1DQ13901 141 aaKnown RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 TMEM249Q2WGJ8 235 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 PAGE3Q5JUK9 113 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 LRIF1Q5T3J3 769 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 REEP3Q6NUK4 255 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 KRT73Q86Y46 540 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 C10orf111Q8N326 155 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 ZNF417Q8TAU3 575 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 ZNF587Q96SQ5 575 aaPredicted RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 RSPO3Q9BXY4 272 aaPredicted RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 LINC00470Q9BZP3 86 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 VAPAQ9P0L0 249 aa11.29□□□□□ -0.6
FN1-226ENST00000496542 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.29□□□□□ -0.6
FN1-226ENST00000496542 FBN3Q75N90 2809 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 IGKV1D-42A0A075B6H8 117 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 AIM2O14862 343 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 TPST1O60507 370 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 SLC43A1O75387 559 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 CRYAAP02489 173 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 CSF3P09919 207 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 CECR9P0C854 216 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 CBLP22681 906 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 AQP1P29972 269 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 GRPRP30550 384 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 AQP5P55064 265 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 SH3BGRP55822 239 aaPredicted RBP11.28□□□□□ -0.6
FN1-226ENST00000496542 SNRPD2P62316 118 aaKnown RBP11.28□□□□□ -0.6
FN1-226ENST00000496542 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
FN1-226ENST00000496542 SCARB2Q14108 478 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 GLIPR1L2Q4G1C9 344 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 AGKQ53H12 422 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 FAM69AQ5T7M9 428 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 ANKRD16Q6P6B7 361 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 DHRS4L2Q6PKH6 230 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 VHLLQ6RSH7 139 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 NANOS1Q8WY41 292 aaKnown RBP11.28□□□□□ -0.6
FN1-226ENST00000496542 SLC38A4Q969I6 547 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 TAAR8Q969N4 342 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 BOD1Q96IK1 185 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 OXGR1Q96P68 337 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 TNFRSF13CQ96RJ3 184 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 CCDC28BQ9BUN5 200 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 KATNB1Q9BVA0 655 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 SPATA5L1Q9BVQ7 753 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 NELFAQ9H3P2 528 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 IKZF5Q9H5V7 419 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 SEC61A2Q9H9S3 476 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 C12orf10Q9HB07 376 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
FN1-226ENST00000496542 TRAV36DV7A0A075B6V5 113 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 ARPC4-TTLL3A0A0A6YYG9 625 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 OR2T1O43869 369 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 ZNF432O94892 652 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 SLC6A2P23975 617 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 RGS8P57771 180 aaPredicted RBP11.27□□□□□ -0.61
FN1-226ENST00000496542 NAAAQ02083 359 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 LOXL1Q08397 574 aaPredicted RBP11.27□□□□□ -0.61
FN1-226ENST00000496542 CARTPTQ16568 116 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 SWI5Q1ZZU3 235 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 MST1LQ2TV78 715 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 C6orf52Q5T4I8 152 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 C5orf46Q6UWT4 87 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 H1FNTQ75WM6 255 aaPredicted RBP11.27□□□□□ -0.61
FN1-226ENST00000496542 CXXC5Q7LFL8 322 aaKnown RBP11.27□□□□□ -0.61
FN1-226ENST00000496542 SLC46A3Q7Z3Q1 461 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 LSMEM1Q8N8F7 131 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 MAGEE2Q8TD90 523 aaPredicted RBP11.27□□□□□ -0.61
FN1-226ENST00000496542 DNAJA4Q8WW22 397 aaPredicted RBP11.27□□□□□ -0.61
FN1-226ENST00000496542 DYDC1Q8WWB3 177 aa11.27□□□□□ -0.61
FN1-226ENST00000496542 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms