RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ALG10BQ5I7T1 473 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 FAM69AQ5T7M9 428 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 FAM91A1Q658Y4 838 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 HMBOX1Q6NT76 420 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 H1FNTQ75WM6 255 aaPredicted RBP11.15□□□□□ -0.62
PTPRF-214ENST00000496043 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 HIPK4Q8NE63 616 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 OR1K1Q8NGR3 316 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 RNF217Q8TC41 542 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 TSPEARQ8WU66 669 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 BCL2L2Q92843 193 aaPredicted RBP11.15□□□□□ -0.62
PTPRF-214ENST00000496043 THOC1Q96FV9 657 aaKnown RBP11.15□□□□□ -0.62
PTPRF-214ENST00000496043 RHNO1Q9BSD3 238 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 CACNG6Q9BXT2 260 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 PMF1-BGLAPU3KQ54 211 aa11.15□□□□□ -0.62
PTPRF-214ENST00000496043 TRAV36DV7A0A075B6V5 113 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 A0A087WUJ7 227 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 LOC102725191A0A1B0GVB3 256 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 SSX4O60224 188 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 SLC43A1O75387 559 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 UPK3AO75631 287 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 MFN2O95140 757 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 LGI1O95970 557 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 HTR2AP28223 471 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 GRPRP30550 384 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-214ENST00000496043 DSCR9P59020 149 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 NCALDP61601 193 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 IL1RL1Q01638 556 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 MFSD13AQ14CX5 517 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 TBRG1Q3YBR2 411 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 GLIPR1L2Q4G1C9 344 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 ANKRD16Q6P6B7 361 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 DPP10Q8N608 796 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 ANKK1Q8NFD2 765 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 OR6S1Q8NH40 331 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 MAGEE2Q8TD90 523 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-214ENST00000496043 ANKRD27Q96NW4 1050 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF317Q96PQ6 595 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-214ENST00000496043 EPYCQ99645 322 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 CPPED1Q9BRF8 314 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-214ENST00000496043 IKZF5Q9H5V7 419 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
PTPRF-214ENST00000496043 MOKQ9UQ07 419 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 RCE1Q9Y256 329 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 ANGPT4Q9Y264 503 aa11.14□□□□□ -0.63
PTPRF-214ENST00000496043 INAFM1C9JVW0 142 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 MS4A18H0YCH9 400 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 RPL36A-HNRNPH2H7BZ11 118 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 M0QX08 132 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 M0R082 166 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 ANGPT2O15123 496 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 EDF1O60869 148 aaKnown RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 FZD7O75084 574 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF432O94892 652 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 TP53P04637 393 aaPredicted RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 CBLP22681 906 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 AQP1P29972 269 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 NUDT6P53370 316 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 SH3BGRP55822 239 aaPredicted RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 ROR2Q01974 943 aaKnown RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 LGALS3BPQ08380 585 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 MS4A18Q3C1V0 323 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 METTL21CQ5VZV1 264 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 B3GLCTQ6Y288 498 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 DNM1P46Q6ZS02 220 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 DHDDSQ86SQ9 333 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 COMTD1Q86VU5 262 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 GPR137CQ8N3F9 429 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 C11orf65Q8NCR3 313 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF417Q8TAU3 575 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF587Q96SQ5 575 aaPredicted RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 CGREF1Q99674 301 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 KCNS3Q9BQ31 491 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
PTPRF-214ENST00000496043 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 SEC14L4Q9UDX3 406 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 CORINQ9Y5Q5 1042 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 CSPG4Q6UVK1 2322 aa11.13□□□□□ -0.63
PTPRF-214ENST00000496043 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 A0A096LPE4 126 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 ARPC4-TTLL3A0A0A6YYG9 625 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 A0A1W2PPZ6 126 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
PTPRF-214ENST00000496043 TPST2O60704 377 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 CRYAAP02489 173 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 C8BP07358 591 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 NQO1P15559 274 aaKnown RBP11.12□□□□□ -0.63
PTPRF-214ENST00000496043 CDH12P55289 794 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 ARF1P84077 181 aaKnown RBP11.12□□□□□ -0.63
PTPRF-214ENST00000496043 DMTNQ08495 405 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 NFYCQ13952 458 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 CYP51A1Q16850 503 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 C3orf36Q3SXR2 165 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms