RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 COQ9O75208 318 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 IGKV1D-16P01601 117 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.43
GPC1-209ENST00000495100 VAMP1P23763 118 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 TACR3P29371 465 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 ETFDHQ16134 617 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 ZNF628Q5EBL2 1059 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 CMTM4Q8IZR5 234 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 ATOH1Q92858 354 aaPredicted RBP12.33□□□□□ -0.43
GPC1-209ENST00000495100 OR10A5Q9H207 317 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 KLHL9Q9P2J3 617 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 RWDD3Q9Y3V2 267 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 SYT5O00445 386 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 MAP3K8P41279 467 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 PRSS12P56730 875 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 GALEQ14376 348 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 ARHGAP11BQ3KRB8 267 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 MRM1Q6IN84 353 aaKnown RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 S100A16Q96FQ6 103 aaKnown RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 ARHGDIGQ99819 225 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 A0A0J9YY10 115 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 A0A1W2PQF6 199 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 SLC19A2O60779 497 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 DDOSTP39656 456 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 TOMM34Q15785 309 aaPredicted RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 VASNQ6EMK4 673 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 ZNF425Q6IV72 752 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 NXF5Q9H1B4 397 aaKnown RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 FGF20Q9NP95 211 aaPredicted RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 CMC2Q9NRP2 79 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.33□□□□□ -0.44
GPC1-209ENST00000495100 PLEKHA6Q9Y2H5 1048 aa12.33□□□□□ -0.44
GPC1-209ENST00000495100 GALR3O60755 368 aaPredicted RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 SPDEFO95238 335 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 FXYD6P3P58550 94 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ARHGAP11AQ6P4F7 1023 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 TMEM151BQ8IW70 566 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 OR2T4Q8NH00 348 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 DNAJA4Q8WW22 397 aaPredicted RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 SEC22AQ96IW7 307 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ERVMER34-1Q9H9K5 563 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 NCDNQ9UBB6 729 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 SF3B6Q9Y3B4 125 aaKnown RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 FITM1A5D6W6 292 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 M0QYG6 137 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 DCTN6O00399 190 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 DPM1O60762 260 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 CTNSO60931 367 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 HPXP02790 462 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ANKRD34CP0C6C1 535 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 KIR2DL1P43626 348 aaPredicted RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 SKP1P63208 163 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 PSG6Q00889 435 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 DUSP6Q16828 381 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 EOGTQ5NDL2 527 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 KCTD9Q7L273 389 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 GPALPP1Q8IXQ4 340 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 CA13Q8N1Q1 262 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 DUSP19Q8WTR2 217 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 C19orf43Q9BQ61 176 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 NXF2Q9GZY0 626 aaKnown RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 RPH3AQ9Y2J0 694 aaPredicted RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 COL6A3P12111 3177 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 PLRG1O43660 514 aaKnown RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 ZFPL1O95159 310 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 CBX7O95931 251 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 IL9P15248 144 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 FCARP24071 287 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 RAD52P43351 418 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 KIAA1024LP59773 190 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ZNF85Q03923 595 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 CD226Q15762 336 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ULK3Q6PHR2 472 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 SNX18Q96RF0 628 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 TTYH1Q9H313 450 aaPredicted RBP12.32□□□□□ -0.44
GPC1-209ENST00000495100 EXO5Q9H790 373 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ADGRL4Q9HBW9 690 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 ITGB1BP2Q9UKP3 347 aa12.32□□□□□ -0.44
GPC1-209ENST00000495100 CACNA1DQ01668 2161 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ZNF879B4DU55 563 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 M0R233 179 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 MPZL1O95297 269 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 SRMP19623 302 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 GZMKP49863 264 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 DUSP8Q13202 625 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 POGLUT1Q8NBL1 392 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 FCAMRQ8WWV6 532 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms