RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 C1DQ13901 141 aaKnown RBP12.31□□□□□ -0.44
VARS-228ENST00000495010 CASP8Q14790 479 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 REP15Q6BDI9 236 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 EPHX4Q8IUS5 362 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 CCDC36Q8IYA8 594 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 TEX29Q8N6K0 151 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 ANKK1Q8NFD2 765 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 TESCQ96BS2 214 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 SLC25A36Q96CQ1 311 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 NELFAQ9H3P2 528 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 AKTIPQ9H8T0 292 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 CACYBPQ9HB71 228 aaKnown RBP12.31□□□□□ -0.44
VARS-228ENST00000495010 RLIMQ9NVW2 624 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 PCDHB10Q9UN67 800 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 USP22Q9UPT9 525 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 DYSFO75923 2080 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 CCDC154A6NI56 674 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 RPL36A-HNRNPH2H7BZ11 118 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 M0R233 179 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 SYNGR3O43761 229 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 TFP02787 698 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 MSMBP08118 114 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 SAGP10523 405 aaPredicted RBP12.3□□□□□ -0.44
VARS-228ENST00000495010 CREB1P16220 341 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 EGR1P18146 543 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 RPS4Y1P22090 263 aaKnown RBP12.3□□□□□ -0.44
VARS-228ENST00000495010 ARRB2P32121 409 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 COMPP49747 757 aaPredicted RBP12.3□□□□□ -0.44
VARS-228ENST00000495010 P2RY4P51582 365 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 SLC9B1Q4ZJI4 515 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 LIN52Q52LA3 116 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 SPANXN4Q5MJ08 99 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
VARS-228ENST00000495010 ZNF621Q6ZSS3 439 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 MDP1Q86V88 176 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 MYPOPQ86VE0 399 aaPredicted RBP12.3□□□□□ -0.44
VARS-228ENST00000495010 OR51F2Q8NH61 342 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 CLDND2Q8NHS1 167 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 FAHD2AQ96GK7 314 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 PANX1Q96RD7 426 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 JMJD8Q96S16 334 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 RBM4Q9BWF3 364 aaKnown RBP12.3□□□□□ -0.44
VARS-228ENST00000495010 ARMC7Q9H6L4 198 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 NOX3Q9HBY0 568 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 BTNL2Q9UIR0 455 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
VARS-228ENST00000495010 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 CDHR4A6H8M9 788 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 TMEM229AB2RXF0 380 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 FAM157AC9JC47 383 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 AKAP8O43823 692 aaKnown RBP12.29□□□□□ -0.44
VARS-228ENST00000495010 BPGMP07738 259 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 TCN1P20061 433 aaPredicted RBP12.29□□□□□ -0.44
VARS-228ENST00000495010 EVX1P49640 407 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 POU3F1Q03052 451 aaPredicted RBP12.29□□□□□ -0.44
VARS-228ENST00000495010 CEACAM16Q2WEN9 425 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 ZNF311Q5JNZ3 666 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 GKAP1Q5VSY0 366 aaPredicted RBP12.29□□□□□ -0.44
VARS-228ENST00000495010 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 ZNF836Q6ZNA1 936 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
VARS-228ENST00000495010 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 NUDCD3Q8IVD9 361 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 KDM8Q8N371 416 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 RIBC1Q8N443 379 aaPredicted RBP12.29□□□□□ -0.44
VARS-228ENST00000495010 OR52P1PQ8NH57 321 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 STK35Q8TDR2 534 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 FAM216AQ8WUB2 273 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 RDH5Q92781 318 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 CCDC115Q96NT0 180 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 LRRC37BQ96QE4 947 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 GPR35Q9HC97 309 aa12.29□□□□□ -0.44
VARS-228ENST00000495010 E9PBE3 544 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 KRT75O95678 551 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 MYZAPP0CAP1 466 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 PNMTP11086 282 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 CD79AP11912 226 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 ACHEP22303 614 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 NR4A1P22736 598 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 ACAA2P42765 397 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 RPS5P46782 204 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 TRMT5Q32P41 509 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 EIF1ADQ8N9N8 165 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 PIK3C3Q8NEB9 887 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 PNPT1Q8TCS8 783 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 MGARPQ8TDB4 240 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 MRPL24Q96A35 216 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 OXGR1Q96P68 337 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
VARS-228ENST00000495010 TREM2Q9NZC2 230 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 CALML5Q9NZT1 146 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 P2RX2Q9UBL9 471 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms