RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 PPIAL4DF5H284 164 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 RS1O15537 224 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 TOM1O60784 492 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 CIAO1O76071 339 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 RBMY1CP0DJD4 496 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 SELENOTP62341 195 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 HTD2P86397 168 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 PJVKQ0ZLH3 352 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 TRIM16LQ309B1 348 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 HSP90AB3PQ58FF7 597 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 AFTPHQ6ULP2 937 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 GDPD3Q7L5L3 318 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZNF573Q86YE8 665 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 GRAMD2AQ8IUY3 354 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 LRRC43Q8N309 656 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 BRSK1Q8TDC3 778 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 ST8SIA1Q92185 356 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 STARD4Q96DR4 205 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 TBX15Q96SF7 602 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 RASL11BQ9BPW5 248 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 DPH5Q9H2P9 285 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 RASD1Q9Y272 281 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 SCN11AQ9UI33 1791 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 MTCL1Q9Y4B5 1905 aaKnown RBP4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ERVV-1B6SEH8 477 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 SNAI2O43623 268 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 PCCAP05165 728 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ANXA13P27216 316 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 KLK7P49862 253 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 DAP3P51398 398 aaKnown RBP4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 MAP2K1Q02750 393 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 RIPK1Q13546 671 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 NSUN5P1Q3KNT7 163 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 C1orf100Q5SVJ3 147 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ACP7Q6ZNF0 438 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 RFLNAQ6ZTI6 216 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 STXBP6Q8NFX7 210 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 FAM3CQ92520 227 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 KCNA7Q96RP8 456 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 RIT2Q99578 217 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 TSG101Q99816 390 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZNF670Q9BS34 389 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 TMEM117Q9H0C3 514 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 POLE3Q9NRF9 147 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 SIGLEC8Q9NYZ4 499 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 C6orf203Q9P0P8 240 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZNF223Q9UK11 482 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 V9GY05 133 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 CDHR2Q9BYE9 1310 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ABCC12Q96J65 1359 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 LAMB4A4D0S4 1761 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 UBR2Q8IWV8 1755 aa4.34□□□□□ -1.71
HMGB3P14-201ENST00000494195 ROBO1Q9Y6N7 1651 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 SLIT2O94813 1529 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 JCADQ9P266 1359 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 MAP3K15Q6ZN16 1313 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 SH3TC1Q8TE82 1336 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 LRATO95237 230 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 P04436 131 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 DEKP35659 375 aaKnown RBP4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 LHX2P50458 406 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 TAS2R19P59542 299 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 GPNMBQ14956 572 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 KCTD19Q17RG1 926 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 ATP6V0D2Q8N8Y2 350 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 FAM210BQ96KR6 192 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 OR2M2Q96R28 347 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 VCPKMTQ9H867 229 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 PATZ1Q9HBE1 687 aaKnown RBP4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 AURKCQ9UQB9 309 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 TP53TG5Q9Y2B4 290 aa4.33□□□□□ -1.72
HMGB3P14-201ENST00000494195 C5P01031 1676 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 CICQ96RK0 1608 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 PALLDQ8WX93 1383 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 MED23Q9ULK4 1368 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 CCDC171Q6TFL3 1326 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 OR10H3O60404 316 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 DFNA5O60443 496 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 ICOSLGO75144 302 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 TM7SF2O76062 418 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 LGALS2P05162 132 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 ALOX5P09917 674 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 NCF1P14598 390 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 PSMA5P28066 241 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 MDH1P40925 334 aaKnown RBP4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 TGFBR3Q03167 851 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 NRF1Q16656 503 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 NCR3LG1Q68D85 454 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 BLOC1S2Q6QNY1 142 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 COX15Q7KZN9 410 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 MOB3BQ86TA1 216 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 OR10T2Q8NGX3 314 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 RAB7BQ96AH8 199 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 NIPSNAP3BQ9BS92 247 aa4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 AATFQ9NY61 560 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P14-201ENST00000494195 NUFIP1Q9UHK0 495 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms