RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	OTX1	P32242	354 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	RPA3	P35244	121 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	RFX2	P48378	723 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ARL4D	P49703	201 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	DCD	P81605	110 aa	Known RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	FABP9	Q0Z7S8	132 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	HYAL2	Q12891	473 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	GAB1	Q13480	694 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	QPRT	Q15274	297 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	DECR1	Q16698	335 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	MPEG1	Q2M385	716 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	SPANXN2	Q5MJ10	180 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	HSDL2	Q6YN16	418 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	MS4A15	Q8N5U1	240 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	EFCAB3	Q8N7B9	438 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	AMER2	Q8N7J2	671 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	OR8J3	Q8NGG0	315 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	C2CD4C	Q8TF44	421 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ASB11	Q8WXH4	323 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	PRRG3	Q9BZD7	231 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	POPDC3	Q9HBV1	291 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	CHST11	Q9NPF2	352 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	SLC13A4	Q9UKG4	626 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ZFHX4	Q86UP3	3567 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	IGHV5-51	A0A0C4DH38	117 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	MYL12B	O14950	172 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ATXN7	O15265	892 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	SLC16A8	O95907	504 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	CYB5R3	P00387	301 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	MT-ND5	P03915	603 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	C8G	P07360	202 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	UGT2B7	P16662	529 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	MYL12A	P19105	171 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	CDH11	P55287	796 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	RRAS2	P62070	204 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	EIF3I	Q13347	325 aa	Known RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	BTNL3	Q6UXE8	466 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	LINGO2	Q7L985	606 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ZNF655	Q8N720	491 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	OR5K1	Q8NHB7	308 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	OR14A16	Q8NHC5	309 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	DNAJB14	Q8TBM8	379 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	SMIM12	Q96EX1	92 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	CMTM7	Q96FZ5	175 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	RAB33B	Q9H082	229 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ABCB9	Q9NP78	766 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	PNO1	Q9NRX1	252 aa	Known RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	MS4A12	Q9NXJ0	267 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	KCMF1	Q9P0J7	381 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	GSKIP	Q9P0R6	139 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	TMEM181	Q9P2C4	612 aa		10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.64	□□□□□ -0.71
BRCA1-222	ENST00000493919	ADAMTS20	P59510	1910 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CXorf65	A6NEN9	183 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	GFY	I3L273	518 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	MT-ND2	P03891	347 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CCL4	P13236	92 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	PVR	P15151	417 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	TBXA2R	P21731	343 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	PSMB5	P28074	263 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	PRDX3	P30048	256 aa	Known RBP	10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	PEBP1	P30086	187 aa	Known RBP	10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	PMEL	P40967	661 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	FOXM1	Q08050	763 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CBFB	Q13951	182 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CSHL1	Q14406	222 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	IRF3	Q14653	427 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	ARL6IP1	Q15041	203 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	C5orf64	Q2M2E5	130 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	ADPRM	Q3LIE5	342 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CATSPERD	Q86XM0	798 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	SVBP	Q8N300	66 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	WDR20	Q8TBZ3	569 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	KAT2A	Q92830	837 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CDS1	Q92903	461 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	SCMH1	Q96GD3	660 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	ZNF300	Q96RE9	604 aa	Predicted RBP	10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	CD180	Q99467	661 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	DPCD	Q9BVM2	203 aa	Predicted RBP	10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	NRSN2	Q9GZP1	204 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	HIPK2	Q9H2X6	1198 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	EMC7	Q9NPA0	242 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	OCIAD1	Q9NX40	245 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	ARL15	Q9NXU5	204 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	ZDHHC2	Q9UIJ5	367 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	IKZF3	Q9UKT9	509 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	PDE10A	Q9Y233	779 aa		10.63	□□□□□ -0.71
BRCA1-222	ENST00000493919	ZNF99	A8MXY4	864 aa	Predicted RBP	10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	C1QTNF9B	B2RNN3	333 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	TNFSF15	O95150	251 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	HTR1A	P08908	422 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	ANKRD34C	P0C6C1	535 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	C1QTNF9	P0C862	333 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	SLC35E2B	P0CK96	405 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	CD8B	P10966	210 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	HIST1H2AD	P20671	130 aa		10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	RBMS1	P29558	406 aa	Known RBP	10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	POLR2I	P36954	125 aa	Known RBP	10.62	□□□□□ -0.71
BRCA1-222	ENST00000493919	NAA10	P41227	235 aa	Predicted RBP	10.62	□□□□□ -0.71

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