RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TRBV11-1A0A0K0K1C0 115 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ANKUB1A6NFN9 424 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 LIPT2A6NK58 231 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SMIM23A6NLE4 172 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 GABRR3A8MPY1 467 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MPTX1A8MV57 137 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 B4DXG7 233 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SUPT3HB4E1H0 165 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 NPIPA5E9PKD4 350 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 GFYI3L273 518 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 WWP2O00308 870 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PSMD3O43242 534 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ERI3O43414 337 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 GMFGO60234 142 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CDC40O60508 579 aaKnown RBP eCLIP2.54□□□□□ -2
PTCD3-218ENST00000493430 SUPT3HO75486 399 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 EEDO75530 441 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 MYO1DO94832 1006 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ACSL3O95573 720 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 C1QCP02747 245 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MT-ND3P03897 115 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ALPPP05187 535 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 HEXBP07686 556 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 FHP07954 510 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CT62P0C5K7 136 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SLC35E2BP0CK96 405 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CCDC166P0CW27 439 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MPC1LP0DKB6 136 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 C8orf89P0DMQ9 161 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 NR2F1P10589 423 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 GP1BBP13224 206 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CD1DP15813 335 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 IL11P20809 199 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MMP11P24347 488 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SLC6A6P31641 620 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 STIP1P31948 543 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 SLC26A3P40879 764 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 DNASE1L1P49184 302 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 TNFSF10P50591 281 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PLA2G16P53816 162 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PLTPP55058 493 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 TMEM50BP56557 158 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SLC26A5P58743 744 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 B3GALT5-AS1P59052 145 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ARG2P78540 354 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MC1RQ01726 317 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 OC90Q02509 493 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 PRDX1Q06830 199 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 PNRC1Q12796 327 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 EPS8Q12929 822 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CALCOCO2Q13137 446 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MELKQ14680 651 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ABRAXAS2Q15018 415 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 LTB4RQ15722 352 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PRAMEF20Q5VT98 475 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 KHDRBS2Q5VWX1 349 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 STEAP4Q687X5 459 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CAPN13Q6MZZ7 669 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 SLC30A6Q6NXT4 461 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 OLIG3Q7RTU3 272 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 GALNTL5Q7Z4T8 443 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 GALNT10Q86SR1 603 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 C17orf64Q86WR6 236 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CCDC71Q8IV32 467 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 CTAGE3PQ8IX95 158 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CENPLQ8N0S6 344 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 POM121L12Q8N7R1 296 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 Q8NBF4 154 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MFSD9Q8NBP5 474 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 MCUQ8NE86 351 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 C17orf47Q8NEP4 570 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 OR52B6Q8NGF0 335 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 OR5M9Q8NGP3 310 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ACTRT1Q8TDG2 376 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SSC4DQ8WTU2 575 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SMAP2Q8WU79 429 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 SLC5A11Q8WWX8 675 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 NCLNQ969V3 563 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PNPLA2Q96AD5 504 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PPWD1Q96BP3 646 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 OTUB1Q96FW1 271 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 SNF8Q96H20 258 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 RADILQ96JH8 1075 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 IMMP1LQ96LU5 166 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CATSPER2Q96P56 530 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PANX3Q96QZ0 392 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 RBBP8Q99708 897 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 NAPGQ99747 312 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 MAPKAP1Q9BPZ7 522 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 FERMT1Q9BQL6 677 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SHCBP1LQ9BZQ2 653 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 UCK2Q9BZX2 261 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 DRC3Q9H069 523 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 DEFB127Q9H1M4 99 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 OR51B5Q9H339 312 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CDC42EP4Q9H3Q1 356 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 KCNK13Q9HB14 408 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 XAB2Q9HCS7 855 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 PNO1Q9NRX1 252 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms