RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 RPL8P62917 257 aaKnown RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CRMP1Q14194 572 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 LAGE3Q14657 143 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 TIGITQ495A1 244 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 FAM53AQ6NSI3 398 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 TMEM53Q6P2H8 277 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 ENPP6Q6UWR7 440 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 APOOLQ6UXV4 268 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 Q6ZRP5 223 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 Q6ZSR9 355 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 PRSS48Q7RTY5 328 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CEACAM19Q7Z692 300 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CARM1Q86X55 608 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CCDC71Q8IV32 467 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 APLFQ8IW19 511 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 BPIFB2Q8N4F0 458 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 C15orf54Q8N8G6 183 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 OR4D9Q8NGE8 314 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 OR10V1Q8NGI7 309 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 FAM110BQ8TC76 370 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 SPPL2AQ8TCT8 520 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 MAGEE2Q8TD90 523 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 MAIP1Q8WWC4 291 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 DNAJB3Q8WWF6 145 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 ZNF707Q96C28 371 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 FMO2Q99518 471 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CABLES2Q9BTV7 478 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 GLIPR2Q9H4G4 154 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 ANKRD19PQ9H560 264 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 NT5MQ9NPB1 228 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 MEPEQ9NQ76 525 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 HEBP1Q9NRV9 189 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 RGS18Q9NS28 235 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 DEPPQ9NTK1 212 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 THYN1Q9P016 225 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 SCML2Q9UQR0 700 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 PEX16Q9Y5Y5 336 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 KALRNO60229 2985 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 LOC400499M0QZD8 3231 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 PCNX2A6NKB5 2137 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.29□□□□□ -1.72
SND1-216ENST00000492840 IGHV3-38A0A0C4DH36 116 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 A0A1W2PPV9 198 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 RS1O15537 224 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 RNF113AO15541 343 aaKnown RBP4.29□□□□□ -1.72
SND1-216ENST00000492840 PCDH7O60245 1069 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 TRIM3O75382 744 aaPredicted RBP4.29□□□□□ -1.72
SND1-216ENST00000492840 CLDN1O95832 211 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 LGI1O95970 557 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 IGHG4P01861 327 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 FCGR3AP08637 254 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 WNT2P09544 360 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 PRSS56P0CW18 603 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 TUBG1P23258 451 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 CD1CP29017 333 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 PDHA2P29803 388 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 PPP2R1BP30154 601 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 BMI1P35226 326 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 MMP12P39900 470 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 NAMPTP43490 491 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 GNPDA1P46926 289 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 CD151P48509 253 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 CDK16Q00536 496 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 LIPEQ05469 1076 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 ZNF177Q13360 481 aaPredicted RBP4.29□□□□□ -1.72
SND1-216ENST00000492840 TGFBIQ15582 683 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 ZRSR1Q15695 479 aaKnown RBP4.29□□□□□ -1.72
SND1-216ENST00000492840 ZIC1Q15915 447 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 KLHL38Q2WGJ6 581 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 FBXO48Q5FWF7 155 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 ACER2Q5QJU3 275 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 C1orf220Q5T0J3 134 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 DCST2Q5T1A1 773 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 OR8G2PQ6IF36 304 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 FRRS1Q6ZNA5 592 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 C1QL2Q7Z5L3 287 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 IFNEQ86WN2 208 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 RFLNBQ8N5W9 214 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 SAMD12Q8N8I0 201 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 OR52B6Q8NGF0 335 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 LMO3Q8TAP4 145 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 FNDC8Q8TC99 324 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 GLYATL2Q8WU03 294 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 NRGNQ92686 78 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 MOCOSQ96EN8 888 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 IFT74Q96LB3 600 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 TAAR1Q96RJ0 339 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 SIKE1Q9BRV8 207 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 HAUS4Q9H6D7 363 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 NMRAL1Q9HBL8 299 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 ZNF334Q9HCZ1 680 aaPredicted RBP4.29□□□□□ -1.72
SND1-216ENST00000492840 TUBG2Q9NRH3 451 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 PITPNC1Q9UKF7 332 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 STARD10Q9Y365 291 aa4.29□□□□□ -1.72
SND1-216ENST00000492840 COMMD3-BMI1R4GMX3 469 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms