RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 COX5AP20674 150 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 IL32P24001 234 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FOXD4Q12950 439 aaPredicted RBP14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ITGADQ13349 1161 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 C1DQ13901 141 aaKnown RBP14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 DAZAP2Q15038 168 aaPredicted RBP14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TMEM200AQ86VY9 491 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CYP4Z1Q86W10 505 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 EPHX4Q8IUS5 362 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FAM86B1Q8N7N1 296 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 STEAP2Q8NFT2 490 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 OR5J2Q8NH18 312 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PFN4Q8NHR9 129 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 KISS1RQ969F8 398 aaPredicted RBP14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ACTR6Q9GZN1 396 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MEPEQ9NQ76 525 aaPredicted RBP14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NANSQ9NR45 359 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TAS2R1Q9NYW7 299 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RHCGQ9UBD6 479 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MALT1Q9UDY8 824 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZNF229Q9UJW7 825 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ENPP4Q9Y6X5 453 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 V9GYQ6 96 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SETXQ7Z333 2677 aaKnown RBP14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LOC102725191A0A1B0GVB3 256 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MS4A18H0YCH9 400 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PLPP3O14495 311 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FFAR1O14842 300 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CASKO14936 926 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PDE5AO76074 875 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PRSS23O95084 383 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 GOSR1O95249 250 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 IGF2P01344 180 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 IGHV1-2P23083 117 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PUDPQ08623 228 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TRAM2Q15035 370 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TSC22D1Q15714 1073 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MS4A18Q3C1V0 323 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NIPAL3Q6P499 406 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 BHLHA15Q7RTS1 189 aaPredicted RBP14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SLC46A3Q7Z3Q1 461 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 UEVLDQ8IX04 471 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SGTBQ96EQ0 304 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PYURFQ96I23 114 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MUC13Q9H3R2 512 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ASB6Q9NWX5 421 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZNF226Q9NYT6 803 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ACTR3BQ9P1U1 418 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 UPB1Q9UBR1 384 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MED31Q9Y3C7 131 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PKDREJQ9NTG1 2253 aa14.38□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 UNC79Q9P2D8 2635 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 AKAP8O43823 692 aaKnown RBP14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CTAG2O75638 210 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LYZL6O75951 148 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HPRP00739 348 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SEMG1P04279 462 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HIST1H2ABP04908 130 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 UMPSP11172 480 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SELENOPP49908 381 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CLDN17P56750 224 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FAPQ12884 760 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TSPO2Q5TGU0 170 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HIST3H2AQ7L7L0 130 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TSEN54Q7Z6J9 526 aaKnown RBP14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 POMGNT2Q8NAT1 580 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HIST1H2ACQ93077 130 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 S100PBPQ96BU1 408 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZC3HAV1LQ96H79 300 aaKnown RBP14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 C7orf34Q96L11 122 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SLCO5A1Q9H2Y9 848 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RASSF1Q9NS23 344 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SLC7A10Q9NS82 523 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MAN2C1Q9NTJ4 1040 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NDUFAF4Q9P032 175 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RCE1Q9Y256 329 aa14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FAM32AQ9Y421 112 aaKnown RBP14.37□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FAM221AA4D161 298 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 OR6C65A6NJZ3 312 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 hCG_2039718K7EN88 272 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TRAF3IP2O43734 574 aaPredicted RBP14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PIP5K1CO60331 668 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 OR7A10O76100 309 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 OR6A2O95222 327 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ASAH2BP0C7U1 165 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ADORA3P0DMS8 318 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RHCEP18577 417 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ATP6V1B2P21281 511 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FUT4P22083 530 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CRYGSP22914 178 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 AHCYP23526 432 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 VLDLRP98155 873 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 POU3F1Q03052 451 aaPredicted RBP14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 DNAL1Q4LDG9 190 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MTX3Q5HYI7 312 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FBXW10Q5XX13 1052 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CYP2R1Q6VVX0 501 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 C22orf34Q6ZV56 151 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NANOGNBQ7Z5D8 188 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PXKQ7Z7A4 578 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms