RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DUSP18Q8NEJ0 188 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 OR7G1Q8NGA0 311 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 HOXB13Q92826 284 aaPredicted RBP20.74■□□□□ 0.91
USF3-203ENST00000491165 CDS1Q92903 461 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 LMF1Q96S06 567 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 TMEM43Q9BTV4 400 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 MTHFD2LQ9H903 347 aaPredicted RBP20.74■□□□□ 0.91
USF3-203ENST00000491165 PLSCR3Q9NRY6 295 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 SLC7A7Q9UM01 511 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 BOD1L1Q8NFC6 3051 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 SYNDIG1LA6NDD5 238 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 LYRM1O43325 122 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 SLC19A2O60779 497 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 Q0VFX4 171 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 BTBD16Q32M84 506 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 CXXC5Q7LFL8 322 aaKnown RBP20.73■□□□□ 0.91
USF3-203ENST00000491165 GID4Q8IVV7 300 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 SIRT6Q8N6T7 355 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 OTULINQ96BN8 352 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 RNF32Q9H0A6 362 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 FBXL4Q9UKA2 621 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 WDR45Q9Y484 360 aa20.73■□□□□ 0.91
USF3-203ENST00000491165 C2orf92A0A1B0GVN3 265 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 CDC14CA4D256 554 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 ANKRD34BA5PLL1 514 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 TMEM200CA6NKL6 621 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 CDC42EP2O14613 210 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 TRIM3O75382 744 aaPredicted RBP20.72■□□□□ 0.91
USF3-203ENST00000491165 IGHEP01854 428 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 THOC7Q6I9Y2 204 aaKnown RBP20.72■□□□□ 0.91
USF3-203ENST00000491165 ZNF836Q6ZNA1 936 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 NDUFAF7Q7L592 441 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 TCTE3Q8IZS6 198 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 THAP3Q8WTV1 239 aaPredicted RBP20.72■□□□□ 0.91
USF3-203ENST00000491165 ADIPOR1Q96A54 375 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 COPS7AQ9UBW8 275 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 KLHL21Q9UJP4 597 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 FAM240BA0A1B0GVZ2 78 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 J3QRE1 110 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 EFSO43281 561 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 INPP1P49441 399 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 BDH1Q02338 343 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 TMEM91Q6ZNR0 172 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 CDRT4Q8N9R6 151 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 OR51G2Q8NGK0 314 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 GAL3ST4Q96RP7 486 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 FAM117AQ9C073 453 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 KCNN2Q9H2S1 579 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 UBQLN3Q9H347 655 aa20.72■□□□□ 0.91
USF3-203ENST00000491165 NSG1A0A0A6YYJ2 146 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 GXYLT2A0PJZ3 443 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 FAM25AB3EWG3 89 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 FAM25CB3EWG5 89 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 FAM25GB3EWG6 89 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 NKX2-8O15522 239 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 RGS9O75916 674 aaPredicted RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 PAICSP22234 425 aaKnown RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 RNF4P78317 190 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 ELP5Q8TE02 316 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 ACOT12Q8WYK0 555 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 ART5Q96L15 291 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 LMF2Q9BU23 707 aaKnown RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 NXF5Q9H1B4 397 aaKnown RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 FBXO34Q9NWN3 711 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 ALG5Q9Y673 324 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 TRBV11-1A0A0K0K1C0 115 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 FAM183AA6NL82 134 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 RNF13O43567 381 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 FAM157BP0CG42 384 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 RNF144AP50876 292 aaPredicted RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 ARHGAP11BQ3KRB8 267 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 EIPR1Q53HC9 387 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 CCNJQ5T5M9 372 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 GLCCI1Q86VQ1 547 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 BRIX1Q8TDN6 353 aaKnown RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 NACC2Q96BF6 587 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 KCNJ15Q99712 375 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 WWTR1Q9GZV5 400 aa20.71■□□□□ 0.91
USF3-203ENST00000491165 ISG20L2Q9H9L3 353 aaKnown RBP20.71■□□□□ 0.91
USF3-203ENST00000491165 GTPBP1O00178 669 aaKnown RBP20.7■□□□□ 0.9
USF3-203ENST00000491165 ZNF354AO60765 605 aaPredicted RBP20.7■□□□□ 0.9
USF3-203ENST00000491165 NKX2-2O95096 273 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 PTNP21246 168 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 GABRA3P34903 492 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 YIF1BQ5BJH7 314 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 TIGD3Q6B0B8 471 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 PLBD1Q6P4A8 553 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 PAMR1Q6UXH9 720 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 RANBP3LQ86VV4 465 aaPredicted RBP20.7■□□□□ 0.9
USF3-203ENST00000491165 ACBD7Q8N6N7 88 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 NDEL1Q9GZM8 345 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 PIGUQ9H490 435 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 NLKQ9UBE8 527 aa20.7■□□□□ 0.9
USF3-203ENST00000491165 UNC119BA6NIH7 251 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 C12orf71A8MTZ7 269 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 MTNR1BP49286 362 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 CLDN20P56880 219 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 NIPAL3Q6P499 406 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 ZCCHC12Q6PEW1 402 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 OR52L1Q8NGH7 329 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms