RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LYNX1P0DP58 116 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 NR2F1P10589 423 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 ARF1P84077 181 aaKnown RBP17.82■□□□□ 0.44
CLIP2-208ENST00000491075 NPRL3Q12980 569 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 SHQ1Q6PI26 577 aaKnown RBP17.82■□□□□ 0.44
CLIP2-208ENST00000491075 CCDC36Q8IYA8 594 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 TMEM186Q96B77 213 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 NOX3Q9HBY0 568 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 RLIMQ9NVW2 624 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 HIF1ANQ9NWT6 349 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 GRIP1Q9Y3R0 1128 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 CMAHPQ9Y471 501 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 SPEF1Q9Y4P9 236 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 MGAM2Q2M2H8 2515 aa17.82■□□□□ 0.44
CLIP2-208ENST00000491075 TMEM229AB2RXF0 380 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 E9PBE3 544 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 SYNGR3O43761 229 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 NPIPB7O75200 414 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 AHSA1O95433 338 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 TFP02787 698 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 EGR1P18146 543 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 S100A3P33764 101 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 ACAA2P42765 397 aaKnown RBP17.81■□□□□ 0.44
CLIP2-208ENST00000491075 EVX1P49640 407 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 CLDN17P56750 224 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 LIN52Q52LA3 116 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 CRLF2Q9HC73 371 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 USP22Q9UPT9 525 aa17.81■□□□□ 0.44
CLIP2-208ENST00000491075 CCDC154A6NI56 674 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 FAM157AC9JC47 383 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 M0R233 179 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 SLC43A1O75387 559 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF432O94892 652 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 MSMBP08118 114 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF43P17038 809 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 GPR6P46095 362 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-208ENST00000491075 SLC9B1Q4ZJI4 515 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 KRT80Q6KB66 452 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF836Q6ZNA1 936 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 MDP1Q86V88 176 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 GPR137CQ8N3F9 429 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 CLDND2Q8NHS1 167 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 MFSD8Q8NHS3 518 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 STK35Q8TDR2 534 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 FAM216AQ8WUB2 273 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 GCDHQ92947 438 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-208ENST00000491075 PANX1Q96RD7 426 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 MS4A5Q9H3V2 200 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 GPR35Q9HC97 309 aa17.8■□□□□ 0.44
CLIP2-208ENST00000491075 DSPPQ9NZW4 1301 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 TMEM89A2RUT3 159 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF503-AS2A6NEH8 195 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 FTCDNL1E5RQL4 147 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 SAGP10523 405 aaPredicted RBP17.79■□□□□ 0.44
CLIP2-208ENST00000491075 PNMTP11086 282 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 NR4A1P22736 598 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 GTF2E2P29084 291 aaKnown RBP17.79■□□□□ 0.44
CLIP2-208ENST00000491075 ELFN2Q5R3F8 820 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 RNF220Q5VTB9 566 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 REP15Q6BDI9 236 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 USP43Q70EL4 1123 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 VRK2Q86Y07 508 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 OR52P1PQ8NH57 321 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 KIF18AQ8NI77 898 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 MRPL24Q96A35 216 aaKnown RBP17.79■□□□□ 0.44
CLIP2-208ENST00000491075 REV1Q9UBZ9 1251 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 LGALS13Q9UHV8 139 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 PCDHB10Q9UN67 800 aa17.79■□□□□ 0.44
CLIP2-208ENST00000491075 MYZAPP0CAP1 466 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 NCF2P19878 526 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-208ENST00000491075 ACHEP22303 614 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 CAPZA2P47755 286 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 HILS1P60008 231 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 CEACAM16Q2WEN9 425 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 COX20Q5RI15 118 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 LRRC34Q8IZ02 419 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 KDM8Q8N371 416 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 TEX29Q8N6K0 151 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF781Q8N8C0 355 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 PIK3C3Q8NEB9 887 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 OR51F2Q8NH61 342 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 LRRC37BQ96QE4 947 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 MRPL37Q9BZE1 423 aaKnown RBP17.78■□□□□ 0.44
CLIP2-208ENST00000491075 RACGAP1Q9H0H5 632 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 NARFLQ9H6Q4 476 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 CALML5Q9NZT1 146 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 P2RX2Q9UBL9 471 aa17.78■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF443Q9Y2A4 671 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-208ENST00000491075 PKD1L1Q8TDX9 2849 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF99A8MXY4 864 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-208ENST00000491075 TRIM77I1YAP6 450 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 ITM2AO43736 263 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 AKAP8O43823 692 aaKnown RBP17.77■□□□□ 0.44
CLIP2-208ENST00000491075 LRRC74AQ0VAA2 488 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF621Q6ZSS3 439 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 NUDCD3Q8IVD9 361 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 PNPT1Q8TCS8 783 aaKnown RBP17.77■□□□□ 0.44
CLIP2-208ENST00000491075 RDH5Q92781 318 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 SLC25A36Q96CQ1 311 aa17.77■□□□□ 0.44
CLIP2-208ENST00000491075 ZNF837Q96EG3 531 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms