RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 POU3F1Q03052 451 aaPredicted RBP12.02□□□□□ -0.49
VARS-227ENST00000489979 GNA13Q14344 377 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 MSMPQ1L6U9 139 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 SLC9B1Q4ZJI4 515 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 ANXA8L1Q5VT79 327 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 C1orf140Q5VVS0 124 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 FAHD2BQ6P2I3 314 aaPredicted RBP12.02□□□□□ -0.49
VARS-227ENST00000489979 LRRC74BQ6ZQY2 392 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 MDP1Q86V88 176 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 RNF130Q86XS8 419 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 KDM8Q8N371 416 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 CADM2Q8N3J6 435 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 OR51F2Q8NH61 342 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
VARS-227ENST00000489979 FAHD2AQ96GK7 314 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 APOPT1Q96IL0 206 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.49
VARS-227ENST00000489979 RACGAP1Q9H0H5 632 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 MTHFD2LQ9H903 347 aaPredicted RBP12.02□□□□□ -0.49
VARS-227ENST00000489979 RLIMQ9NVW2 624 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 RASD1Q9Y272 281 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
VARS-227ENST00000489979 TGP01266 2768 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 RPL36A-HNRNPH2H7BZ11 118 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 M0R233 179 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 SYNGR3O43761 229 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 ZNF432O94892 652 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 DBIP07108 87 aaKnown RBP12.01□□□□□ -0.49
VARS-227ENST00000489979 ACHEP22303 614 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 NR4A1P22736 598 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 SERPINB5P36952 375 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 ACAA2P42765 397 aaKnown RBP12.01□□□□□ -0.49
VARS-227ENST00000489979 CAPZA2P47755 286 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 ARFIP2P53365 341 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 CASP8Q14790 479 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 AWAT1Q58HT5 328 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 C1orf229Q6ZS94 237 aaPredicted RBP12.01□□□□□ -0.49
VARS-227ENST00000489979 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 VPS37AQ8NEZ2 397 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 RDH5Q92781 318 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 YIPF5Q969M3 257 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 MRPL24Q96A35 216 aaKnown RBP12.01□□□□□ -0.49
VARS-227ENST00000489979 ZNF837Q96EG3 531 aaPredicted RBP12.01□□□□□ -0.49
VARS-227ENST00000489979 PPP1R36Q96LQ0 422 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 JMJD8Q96S16 334 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 PPCSQ9HAB8 311 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 MKS1Q9NXB0 559 aa12.01□□□□□ -0.49
VARS-227ENST00000489979 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
VARS-227ENST00000489979 TRAV20A0A0B4J274 112 aa12□□□□□ -0.49
VARS-227ENST00000489979 SLC43A1O75387 559 aa12□□□□□ -0.49
VARS-227ENST00000489979 SEC14L2O76054 403 aa12□□□□□ -0.49
VARS-227ENST00000489979 PNPP00491 289 aa12□□□□□ -0.49
VARS-227ENST00000489979 AVPP01185 164 aa12□□□□□ -0.49
VARS-227ENST00000489979 TFPTP0C1Z6 253 aa12□□□□□ -0.49
VARS-227ENST00000489979 ZNF43P17038 809 aa12□□□□□ -0.49
VARS-227ENST00000489979 ALDH3B1P43353 468 aa12□□□□□ -0.49
VARS-227ENST00000489979 LIMS1P48059 325 aa12□□□□□ -0.49
VARS-227ENST00000489979 EVX1P49640 407 aa12□□□□□ -0.49
VARS-227ENST00000489979 SEC24CP53992 1094 aa12□□□□□ -0.49
VARS-227ENST00000489979 SMU1Q2TAY7 513 aa12□□□□□ -0.49
VARS-227ENST00000489979 CEACAM16Q2WEN9 425 aa12□□□□□ -0.49
VARS-227ENST00000489979 SPANXN4Q5MJ08 99 aa12□□□□□ -0.49
VARS-227ENST00000489979 PRR31Q5SQ13 230 aa12□□□□□ -0.49
VARS-227ENST00000489979 WBP2NLQ6ICG8 309 aa12□□□□□ -0.49
VARS-227ENST00000489979 GPR137CQ8N3F9 429 aa12□□□□□ -0.49
VARS-227ENST00000489979 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
VARS-227ENST00000489979 SYT3Q9BQG1 590 aa12□□□□□ -0.49
VARS-227ENST00000489979 RHOXF2Q9BQY4 288 aa12□□□□□ -0.49
VARS-227ENST00000489979 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
VARS-227ENST00000489979 AKTIPQ9H8T0 292 aa12□□□□□ -0.49
VARS-227ENST00000489979 ZNF275Q9NSD4 429 aaPredicted RBP12□□□□□ -0.49
VARS-227ENST00000489979 CDHR4A6H8M9 788 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 FTCDNL1E5RQL4 147 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 PPIHO43447 177 aaKnown RBP11.99□□□□□ -0.49
VARS-227ENST00000489979 NPIPB7O75200 414 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 SPAG7O75391 227 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 NR2F1P10589 423 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 PNMTP11086 282 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 TMEM33P57088 247 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 COPZ1P61923 177 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 LMO4P61968 165 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 MAD2L1BPQ15013 274 aaPredicted RBP11.99□□□□□ -0.49
VARS-227ENST00000489979 PDCD2Q16342 344 aaPredicted RBP11.99□□□□□ -0.49
VARS-227ENST00000489979 ZNF836Q6ZNA1 936 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 LRP11Q86VZ4 500 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 VRK2Q86Y07 508 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 CCDC36Q8IYA8 594 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 PEX5LQ8IYB4 626 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 TESCQ96BS2 214 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 SLC25A36Q96CQ1 311 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 MS4A3Q96HJ5 214 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 MYEF2Q9P2K5 600 aaKnown RBP11.99□□□□□ -0.49
VARS-227ENST00000489979 SEC14L4Q9UDX3 406 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 RCE1Q9Y256 329 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 PCDHGB1Q9Y5G3 927 aa11.99□□□□□ -0.49
VARS-227ENST00000489979 A0A096LPI6 279 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms