RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 H0YAE9 185 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 CHP2O43745 196 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 NPIPB7O75200 414 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 AQP8O94778 261 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 SYNGR4O95473 234 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 PLGP00747 810 aaPredicted RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 H1F0P07305 194 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 LYNP07948 512 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF23P17027 643 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 IL11P20809 199 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 TACR3P29371 465 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 DNAJA1P31689 397 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 UGT2B15P54855 530 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 TAS2R41P59536 307 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 SIRPAP78324 504 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 SPIBQ01892 262 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 EGR4Q05215 589 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 GUSBP1Q15486 140 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 EXOC3L2Q2M3D2 409 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 CTU2Q2VPK5 515 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 HBMQ6B0K9 141 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 VWA1Q6PCB0 445 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 PODNL1Q6PEZ8 512 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 FAM214BQ7L5A3 538 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 BTLAQ7Z6A9 289 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 ADGRG3Q86Y34 549 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 CADM2Q8N3J6 435 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEM255BQ8WV15 326 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 NRBF2Q96F24 287 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 GMPPAQ96IJ6 420 aaPredicted RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 MRGPRX4Q96LA9 322 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 KLHL15Q96M94 604 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 EPYCQ99645 322 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 CIB1Q99828 191 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 RBM4BQ9BQ04 359 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 PSD2Q9BQI7 771 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 RBM4Q9BWF3 364 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 YTHDF1Q9BYJ9 559 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 FAM192AQ9GZU8 254 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 ANKRD19PQ9H560 264 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 C12orf10Q9HB07 376 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 GLRX2Q9NS18 164 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 PROCRQ9UNN8 238 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 EMC9Q9Y3B6 208 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 U3KQV3 271 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 OTOGQ6ZRI0 2925 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 MPDZO75970 2070 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 A0A087WUJ7 227 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 A0A0J9YW62 118 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SH3PXD2BA1X283 911 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 G3V2T6 193 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TNFRSF11BO00300 401 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TNFSF11O14788 317 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CASKO14936 926 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CXCL13O43927 109 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 PIP5K1CO60331 668 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SS18L1O75177 396 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 GADD45GO95257 159 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CGAP01215 116 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CDH2P19022 906 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 PTNP21246 168 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 FPR1P21462 350 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CD79BP40259 229 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 ALDH3A2P51648 485 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 RAD23AP54725 363 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CTBP2P56545 445 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CARD18P57730 90 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 ST3GAL3Q11203 375 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SELENBP1Q13228 472 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TRAM2Q15035 370 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TESK1Q15569 626 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 ALG10BQ5I7T1 473 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TTC23Q5W5X9 447 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 GTF2IRD2BQ6EKJ0 949 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 ULK3Q6PHR2 472 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SHQ1Q6PI26 577 aaKnown RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SPNS3Q6ZMD2 512 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 GRINAQ7Z429 371 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 GTF2IRD2Q86UP8 949 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CYP4Z1Q86W10 505 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CDC20BQ86Y33 519 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CBR4Q8N4T8 237 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 DHRSXQ8N5I4 330 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 OR6K3Q8NGY3 331 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 OR52J3Q8NH60 311 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 OR5K1Q8NHB7 308 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 DNAJA4Q8WW22 397 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 GPA33Q99795 319 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC29A1Q99808 456 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 FNDC11Q9BVV2 318 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 ANKRD60Q9BZ19 345 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 GABARAPL1Q9H0R8 117 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 OPN3Q9H1Y3 402 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEM185BQ9H7F4 350 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 REEP1Q9H902 201 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEM27Q9HBJ8 222 aa9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 MEPEQ9NQ76 525 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-208ENST00000489554 SMPD3Q9NY59 655 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms