RNA–Protein interactions for RNA: ENST00000489344.5

RBM3-208, Transcript of RNA binding motif protein 3, humanhuman

TSL 2

Gene RBM3, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-208ENST00000489344 COX5AP20674 150 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 ENPP1P22413 925 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 CALB2P22676 271 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 SLC7A2P52569 658 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 CBX1P83916 185 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 MXRA7P84157 204 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 FOXF1Q12946 379 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 VMACQ2NL98 169 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
RBM3-208ENST00000489344 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
RBM3-208ENST00000489344 ERICH5Q6P6B1 374 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
RBM3-208ENST00000489344 VRK2Q86Y07 508 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 ZNF433Q8N7K0 673 aaPredicted RBP12.11□□□□□ -0.47
RBM3-208ENST00000489344 ATP6V1C2Q8NEY4 427 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 B4GALNT2Q8NHY0 566 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 WDR60Q8WVS4 1066 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 SORCS2Q96PQ0 1159 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
RBM3-208ENST00000489344 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 TMEFF2Q9UIK5 374 aaPredicted RBP12.11□□□□□ -0.47
RBM3-208ENST00000489344 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 SLC35A3Q9Y2D2 325 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 CARD8Q9Y2G2 431 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
RBM3-208ENST00000489344 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 CLDN24A6NM45 220 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 NME4O00746 187 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 SMAD9O15198 467 aaKnown RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 EFNA2O43921 213 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 EIF4E2O60573 245 aaKnown RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 UBL4AP11441 157 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 PGM1P36871 562 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 P2RX1P51575 399 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 SLC25A3Q00325 362 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 ZNF117Q03924 483 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 LIPEQ05469 1076 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 LARS2Q15031 903 aaKnown RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 NDUFAF6Q330K2 333 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 CBLN3Q6UW01 205 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 C16orf89Q6UX73 402 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 KRT73Q86Y46 540 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 CMIPQ8IY22 773 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 PGAM4Q8N0Y7 254 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 SEMA6DQ8NFY4 1073 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 OR2T12Q8NG77 320 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 FBXO27Q8NI29 283 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 ZFAND2BQ8WV99 257 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 GCDHQ92947 438 aaPredicted RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 FBXO17Q96EF6 278 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 ZNF300Q96RE9 604 aaPredicted RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 ZNF607Q96SK3 696 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 PSD2Q9BQI7 771 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 SPATA5L1Q9BVQ7 753 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 C1QTNF6Q9BXI9 259 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 LAT2Q9GZY6 243 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 NDE1Q9NXR1 346 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 ABCD2Q9UBJ2 740 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 ING1Q9UK53 422 aaPredicted RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 USP22Q9UPT9 525 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 SLC25A15Q9Y619 301 aa12.1□□□□□ -0.47
RBM3-208ENST00000489344 GPC6Q9Y625 555 aaPredicted RBP12.1□□□□□ -0.47
RBM3-208ENST00000489344 LOC390937A0A1W2PQ73 354 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 CIB4A0PJX0 185 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 ELOVL7A1L3X0 281 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 GJE1A6NN92 205 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 FAM220BPB1ANY3 271 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 M0QX08 132 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 OIP5O43482 229 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 SERPINB7O75635 380 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 CYP7B1O75881 506 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 UBOX5O94941 541 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 UBTFL6P0CB48 400 aaPredicted RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 ELK4P28324 431 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 AQP1P29972 269 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 APOBEC3AP31941 199 aaPredicted RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 PCGF2P35227 344 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 EIF1P41567 113 aaKnown RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 PCBP3P57721 371 aaKnown RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 LIN52Q52LA3 116 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 ZNF311Q5JNZ3 666 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 INTS11Q5TA45 600 aaKnown RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 MICU2Q8IYU8 434 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 CNOT9Q92600 299 aaKnown RBP12.09□□□□□ -0.47
RBM3-208ENST00000489344 ARMC7Q9H6L4 198 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 SPAG4Q9NPE6 437 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 ADA2Q9NZK5 511 aa12.09□□□□□ -0.47
RBM3-208ENST00000489344 TMEM181Q9P2C4 612 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms