RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CADP27708 2225 aa12.12□□□□□ -0.47
SPTLC1-207ENST00000488921 NF1P21359 2839 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 A0A1W2PR80 420 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 TRIM64A6NGJ6 449 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 TRIM64BA6NI03 449 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 TPST1O60507 370 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 SHOX2O60902 331 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 MFN2O95140 757 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 DRD4P21917 467 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 SELENOPP49908 381 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 PCBP3P57721 371 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 MTPNP58546 118 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 INTS11Q5TA45 600 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 NIPAL3Q6P499 406 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 SPATA21Q7Z572 469 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 PTOV1Q86YD1 416 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 OR6S1Q8NH40 331 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 KTI12Q96EK9 354 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 POM121Q96HA1 1249 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 CCT8L2Q96SF2 557 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 DHRS9Q9BPW9 319 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 TMEM120AQ9BXJ8 343 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 LINC00470Q9BZP3 86 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 MOV10Q9HCE1 1003 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 CORINQ9Y5Q5 1042 aa12.11□□□□□ -0.47
SPTLC1-207ENST00000488921 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 A0A087WUJ7 227 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 A0A0B4J2E0 115 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 A0A1B0GX12 115 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 M0R082 166 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 SMAD7O15105 426 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 FMO6PO60774 539 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 C8BP07358 591 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 CDH2P19022 906 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 GRPRP30550 384 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 CDKN1AP38936 164 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 CLDN17P56750 224 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 IL1RL1Q01638 556 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 LTBQ06643 244 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 DMTNQ08495 405 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 SF3A3Q12874 501 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 C1DQ13901 141 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 MAPRE2Q15555 327 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 OR1Q1Q15612 314 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 NRF1Q16656 503 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 TRMT5Q32P41 509 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 HMBOX1Q6NT76 420 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 PATL1Q86TB9 770 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 RETREG3Q86VR2 466 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 EPHX4Q8IUS5 362 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 FBXL14Q8N1E6 418 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 SCAIQ8N9R8 606 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 SMYD1Q8NB12 490 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 ANKK1Q8NFD2 765 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF417Q8TAU3 575 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 RASSF5Q8WWW0 418 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 TAAR8Q969N4 342 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 HS6ST2Q96MM7 605 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF587Q96SQ5 575 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 SMR3AQ99954 134 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 SH3GL1Q99961 368 aa12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 KAT8Q9H7Z6 458 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-207ENST00000488921 IGKV1D-42A0A075B6H8 117 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 BBIP1A8MTZ0 92 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC43A1O75387 559 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 LGI1O95970 557 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 FAM107AO95990 144 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 NQO1P15559 274 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 TTKP33981 857 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 PCGF2P35227 344 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 UBE2NP61088 152 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 SLC25A3Q00325 362 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 SPOCK1Q08629 439 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 CYLC2Q14093 348 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 VEZF1Q14119 521 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 SELPLGQ14242 412 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 MMEL1Q495T6 779 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 COQ5Q5HYK3 327 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF544Q6NX49 715 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 ZNF613Q6PF04 617 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 H1FNTQ75WM6 255 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 CIARTQ8N365 385 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 MUC15Q8N387 334 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 GPR137CQ8N3F9 429 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 PIK3C3Q8NEB9 887 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
SPTLC1-207ENST00000488921 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms