RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DNAJA4Q8WW22 397 aaPredicted RBP10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 BCL2L2Q92843 193 aaPredicted RBP10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 OXGR1Q96P68 337 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 ALKBH3Q96Q83 286 aaPredicted RBP10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 ZNF607Q96SK3 696 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 ZNF587Q96SQ5 575 aaPredicted RBP10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 C12orf10Q9HB07 376 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 BARX1Q9HBU1 254 aaPredicted RBP10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 NPHS2Q9NP85 383 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 SELENONQ9NZV5 590 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 LEF1Q9UJU2 399 aaPredicted RBP10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 SLC13A4Q9UKG4 626 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 MOKQ9UQ07 419 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 NDUFAF1Q9Y375 327 aa10.43□□□□□ -0.74
CCHCR1-215ENST00000488920 NSD1Q96L73 2696 aaPredicted RBP10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TRAV36DV7A0A075B6V5 113 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 OR6C65A6NJZ3 312 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 ATP6V1G2-DDX39BF2Z307 99 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 AIM2O14862 343 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 OR2T1O43869 369 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TPST2O60704 377 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 MFN2O95140 757 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 GRPRP30550 384 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 RGS8P57771 180 aaPredicted RBP10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 UBE2NP61088 152 aaKnown RBP10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 NCALDP61601 193 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TUBA1BP68363 451 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TUBA4AP68366 448 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 ROR2Q01974 943 aaKnown RBP10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 KRTAP1-1Q07627 177 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 SELPLGQ14242 412 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 RAB35Q15286 201 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 OR1Q1Q15612 314 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 FAM69AQ5T7M9 428 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 HMBOX1Q6NT76 420 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 ZNF544Q6NX49 715 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 DNM1P46Q6ZS02 220 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TUBA1AQ71U36 451 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 H1FNTQ75WM6 255 aaPredicted RBP10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 DHDDSQ86SQ9 333 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 RETREG3Q86VR2 466 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 PTOV1Q86YD1 416 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 SMYD1Q8NB12 490 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 HIPK4Q8NE63 616 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 SLC38A4Q969I6 547 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 SLC47A1Q96FL8 570 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 BOD1Q96IK1 185 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 LINC00470Q9BZP3 86 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 ZNF385DQ9H6B1 395 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 VIPAS39Q9H9C1 493 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TMEM27Q9HBJ8 222 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 KLHL14Q9P2G3 628 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 B3GAT1Q9P2W7 334 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 TRIM33Q9UPN9 1127 aa10.42□□□□□ -0.74
CCHCR1-215ENST00000488920 A0A087WUJ7 227 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 IGHV1-18A0A0C4DH31 117 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 A0A0G2JND7 137 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 MS4A18H0YCH9 400 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 M0QX08 132 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 M0R3H8 397 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ANGPT2O15123 496 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 EDF1O60869 148 aaKnown RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 SLC43A1O75387 559 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ZNF432O94892 652 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 APOBEC3AP31941 199 aaPredicted RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 NUDT6P53370 316 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 CDH12P55289 794 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 MTPNP58546 118 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ARF1P84077 181 aaKnown RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 NRF1Q16656 503 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 CYP51A1Q16850 503 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 MS4A18Q3C1V0 323 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 C1QTNF12Q5T7M4 302 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 FAM91A1Q658Y4 838 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ANKRD16Q6P6B7 361 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 C5orf46Q6UWT4 87 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 NET1Q7Z628 596 aaPredicted RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 PRIMA1Q86XR5 153 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 DPP10Q8N608 796 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 C10orf53Q8N6V4 93 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 C11orf65Q8NCR3 313 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ZNF837Q96EG3 531 aaPredicted RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ANKRD27Q96NW4 1050 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 SLC38A2Q96QD8 506 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 CGREF1Q99674 301 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 RHNO1Q9BSD3 238 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 OBP2BQ9NPH6 170 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ARGLU1Q9NWB6 273 aaPredicted RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 TESQ9UGI8 421 aaKnown RBP10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 ANGPT4Q9Y264 503 aa10.41□□□□□ -0.74
CCHCR1-215ENST00000488920 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 A0A0B4J2E0 115 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 LOC102725191A0A1B0GVB3 256 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 A0A1B0GX12 115 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 LRRN3E7EW58 273 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 FZD7O75084 574 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 HPRP00739 348 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 BGLAPP02818 100 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms