RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 EEF1A1P5Q5VTE0 462 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 GTF2IRD2BQ6EKJ0 949 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 CASP12Q6UXS9 341 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 TFAP2EQ6VUC0 442 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 MAMDC2Q7Z304 686 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 NANOGNBQ7Z5D8 188 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 GALNT5Q7Z7M9 940 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 GTF2IRD2Q86UP8 949 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 SCAIQ8N9R8 606 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 OR13C2Q8NGS9 318 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 OR6S1Q8NH40 331 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 ACOT11Q8WXI4 607 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 SGTBQ96EQ0 304 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 RSRC1Q96IZ7 334 aaKnown RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 HS6ST2Q96MM7 605 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF385AQ96PM9 386 aaKnown RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 PSMG3-AS1Q96PY0 264 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 KLHL4Q9C0H6 718 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 MMADHCQ9H3L0 296 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 PIGMQ9H3S5 423 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 ANKRD19PQ9H560 264 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 FKRPQ9H9S5 495 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 GP6Q9HCN6 339 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 NANSQ9NR45 359 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 GALNT8Q9NY28 637 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 MRPL39Q9NYK5 338 aaKnown RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 JKAMPQ9P055 326 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 CORINQ9Y5Q5 1042 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 PRR14LQ5THK1 2151 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 UNC79Q9P2D8 2635 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF724A8MTY0 619 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 C11orf98E9PRG8 122 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 TRAF3IP2O43734 574 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 OR7A10O76100 309 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 GADD45GO95257 159 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 IGHV3-9P01782 118 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 ASAH2BP0C7U1 165 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 RAP2AP10114 183 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 CD8BP10966 210 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 HLA-DOBP13765 273 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 MAKP20794 623 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 COL8A1P27658 744 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 CCKARP32238 428 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 NTF4P34130 210 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 POU3F1Q03052 451 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 PPP1R8Q12972 351 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 SNTB1Q13884 538 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 MFSD13AQ14CX5 517 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 LAPTM4AQ15012 233 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 PDK3Q15120 406 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 HIST2H2BCQ6DN03 193 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 TMEM225Q6GV28 225 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF474Q6S9Z5 364 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 MBOAT2Q6ZWT7 520 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 H1FNTQ75WM6 255 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 PIWIL3Q7Z3Z3 882 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 EPHX4Q8IUS5 362 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 ADPRHL1Q8NDY3 354 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 OR4K5Q8NGD3 323 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 OR5J2Q8NH18 312 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 SLCO4A1Q96BD0 722 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 BPIFA2Q96DR5 249 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 FAM46AQ96IP4 442 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF347Q96SE7 839 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 TACO1Q9BSH4 297 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 FUZQ9BT04 418 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 RBM24Q9BX46 236 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 PLEKHB1Q9UF11 243 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 PRSS50Q9UI38 385 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF229Q9UJW7 825 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 RASD1Q9Y272 281 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 B3GALT5Q9Y2C3 310 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 NOSIPQ9Y314 301 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 LYVE1Q9Y5Y7 322 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 SETXQ7Z333 2677 aaKnown RBP9.8□□□□□ -0.84
UBE4B-210ENST00000488228 CRYBG3Q68DQ2 2970 aa9.8□□□□□ -0.84
UBE4B-210ENST00000488228 NBPF19A0A087WUL8 3843 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 HRNRQ86YZ3 2850 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 TRAV27A0A087WT01 109 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 SH3PXD2BA1X283 911 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 EFCAB9A8MZ26 197 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 PLPP3O14495 311 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 GPR171O14626 319 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 MSTNO14793 375 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 FKBP6O75344 327 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 VAMP5O95183 116 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 ADORA3P0DMS8 318 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 SAGP10523 405 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 OR3A2P47893 321 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 CLDN17P56750 224 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 PRKCDQ05655 676 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 RPL18Q07020 188 aaKnown RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 LGALS3BPQ08380 585 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 PUDPQ08623 228 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 POU4F3Q15319 338 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 WDFY1Q8IWB7 410 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 UEVLDQ8IX04 471 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF100Q8IYN0 542 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 ZIC4Q8N9L1 334 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF610Q8N9Z0 462 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms