RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 HNF1AP20823 631 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 SERPINF1P36955 418 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 SELENOPP49908 381 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 PPOXP50336 477 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 MVDP53602 400 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 CRISP3P54108 245 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 BNIP2Q12982 314 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 LARS2Q15031 903 aaKnown RBP7.43□□□□□ -1.22
PRKCB-208ENST00000487674 EFNB3Q15768 340 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 ADIPOQQ15848 244 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 KRTAP24-1Q3LI83 254 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 C1orf140Q5VVS0 124 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 NIPAL3Q6P499 406 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 CREB3L2Q70SY1 520 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 VRK2Q86Y07 508 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 CADM2Q8N3J6 435 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 FAM169BQ8N8A8 192 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 MAGEE2Q8TD90 523 aaPredicted RBP7.43□□□□□ -1.22
PRKCB-208ENST00000487674 LINC00470Q9BZP3 86 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 ARMC7Q9H6L4 198 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 CACYBPQ9HB71 228 aaKnown RBP7.43□□□□□ -1.22
PRKCB-208ENST00000487674 THUMPD1Q9NXG2 353 aaKnown RBP7.43□□□□□ -1.22
PRKCB-208ENST00000487674 CRNNQ9UBG3 495 aaPredicted RBP7.43□□□□□ -1.22
PRKCB-208ENST00000487674 FBXO9Q9UK97 447 aaPredicted RBP7.43□□□□□ -1.22
PRKCB-208ENST00000487674 RCE1Q9Y256 329 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 RASD1Q9Y272 281 aa7.43□□□□□ -1.22
PRKCB-208ENST00000487674 IGHV4-61A0A0C4DH41 118 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 LOC100289279A0A1B0GTE1 492 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 TMEM247A6NEH6 219 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 FTCDNL1E5RQL4 147 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 HDAC3O15379 428 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 FZD7O75084 574 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 AHSA1O95433 338 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 IGKV3-15P01624 115 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 IGLV1-44P01699 117 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 TFPTP0C1Z6 253 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 OR4A8P0C604 315 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 CECR9P0C854 216 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ZCCHC18P0CG32 403 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 PRG2P13727 222 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 APEHP13798 732 aaKnown RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ETFAP13804 333 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 NCF2P19878 526 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 GTF2E2P29084 291 aaKnown RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 EPHA3P29320 983 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 CRATP43155 626 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 DSTNP60981 165 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 NAAAQ02083 359 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 LGALS3BPQ08380 585 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 MPP2Q14168 576 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 CARTPTQ16568 116 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 PDCD4Q53EL6 469 aaKnown RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 TNFAIP8L3Q5GJ75 292 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 RPS26P11Q5JNZ5 115 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 FAM120AOSQ5T036 256 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ANKRD16Q6P6B7 361 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 MSANTD1Q6ZTZ1 278 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 LINGO2Q7L985 606 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 EPHX4Q8IUS5 362 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ARIH2OSQ8N7S6 290 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ANKS4BQ8N8V4 417 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF540Q8NDQ6 660 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 NUP37Q8NFH4 326 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 OR4F15Q8NGB8 312 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 MFSD8Q8NHS3 518 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 STK35Q8TDR2 534 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 SLC38A5Q8WUX1 472 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 BCL2L2Q92843 193 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 SLC35B4Q969S0 331 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 C3orf49Q96BT1 292 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 MSI2Q96DH6 328 aaKnown RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 TMEM19Q96HH6 336 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 VRK1Q99986 396 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 SPATA9Q9BWV2 254 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 NELFAQ9H3P2 528 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 CENPHQ9H3R5 247 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 PLK3Q9H4B4 646 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 WDR55Q9H6Y2 383 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF442Q9H7R0 627 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 SLC6A13Q9NSD5 602 aa7.42□□□□□ -1.22
PRKCB-208ENST00000487674 A0A096LPE4 126 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 A0A0G2JPF8 293 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 A0A1W2PPZ6 126 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 HNRNPCL2B2RXH8 293 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 HNRNPCL3B7ZW38 293 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 SLCO1B7G3V0H7 640 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 RPL36A-HNRNPH2H7BZ11 118 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 HNRNPCL1O60812 293 aaKnown RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 SNNO75324 88 aaPredicted RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 UPK3AO75631 287 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 SLC22A3O75751 556 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ANP32DO95626 131 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ERCC1P07992 297 aaPredicted RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 HNRNPCL4P0DMR1 293 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 PNMTP11086 282 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF23P17027 643 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 CALCRP30988 508 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 IDH3GP51553 393 aaPredicted RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 TUBA1BP68363 451 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms