RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PTPRDP23468 1912 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 A0A1W2PQF6 199 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 METTL12A8MUP2 240 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 EIF4E2O60573 245 aaKnown RBP10.85□□□□□ -0.67
TRA2B-214ENST00000487615 CD53P19397 219 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 CDC20Q12834 499 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 Q499Y3 187 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 FAM69AQ5T7M9 428 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 MARCH3Q86UD3 253 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 MFSD4AQ8N468 514 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PDCD1LG2Q9BQ51 273 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PSD2Q9BQI7 771 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 SLC19A3Q9BZV2 496 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 IRF2BPLQ9H1B7 796 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 NOX4Q9NPH5 578 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 PCOLCE2Q9UKZ9 415 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 SIT1Q9Y3P8 196 aa10.85□□□□□ -0.67
TRA2B-214ENST00000487615 OR2W5A6NFC9 320 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM212A6NML5 194 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 LMO7DNF2Z398 122 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 M0R233 179 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 FCARP24071 287 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 PRICKLE4Q2TBC4 344 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 PCGF3Q3KNV8 242 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TMPRSS11FQ6ZWK6 438 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SLC35D2Q76EJ3 337 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 DNAJC5GQ8N7S2 189 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 OR4N2Q8NGD1 307 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 LGALS14Q8TCE9 139 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TSLPQ969D9 159 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM106AQ96A25 262 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 CPNE2Q96FN4 548 aaPredicted RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 PGAM5Q96HS1 289 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SCGB3A2Q96PL1 93 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 OR6C1Q96RD1 312 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 MED18Q9BUE0 208 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 FOXQ1Q9C009 403 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF224Q9NZL3 707 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TBC1D24Q9ULP9 559 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 MAP1BP46821 2468 aaKnown RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 IGKV1-8A0A0C4DH67 115 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SYT7O43581 403 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TGM4P49221 684 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 C17orf67Q0P5P2 114 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 CCDC190Q86UF4 302 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 OR51J1Q9H342 316 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 A8MVM7 634 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF878C9JN71 531 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF593O00488 134 aaPredicted RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 NME1P15531 152 aaKnown RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 DCDP81605 110 aaKnown RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 YIF1BQ5BJH7 314 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 VWA2Q5GFL6 755 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ATAD3CQ5T2N8 411 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM244Q5VVB8 128 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 MORN4Q8NDC4 146 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 OR4M1Q8NGD0 313 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ELF4Q99607 663 aaPredicted RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 WDR77Q9BQA1 342 aaPredicted RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 NXF5Q9H1B4 397 aaKnown RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 TRIM64A6NGJ6 449 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 PAHP00439 452 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SPI1P17947 270 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 PEBP1P30086 187 aaKnown RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 DIO1P49895 249 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ASAH1Q13510 395 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 UBE2NLQ5JXB2 153 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SLC16A9Q7RTY1 509 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 ABI3BPQ7Z7G0 1075 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 FAM46BQ96A09 425 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SLC41A2Q96JW4 573 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 HPF1Q9NWY4 346 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 SIGLEC7Q9Y286 467 aa10.84□□□□□ -0.67
TRA2B-214ENST00000487615 PTRH2Q9Y3E5 179 aaKnown RBP10.84□□□□□ -0.67
TRA2B-214ENST00000487615 NARSO43776 548 aaKnown RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 PRKNO60260 465 aaPredicted RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 PRAF2O60831 178 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 SNAPC5O75971 98 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 MT-ATP6P00846 226 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 LIMS3P0CW19 117 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 LIMS4P0CW20 117 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 PGAM2P15259 253 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 CLDN12P56749 244 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 SNRPD2P62316 118 aaKnown RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 DLX2Q07687 328 aaPredicted RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 METTL11BQ5VVY1 283 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 TMEM205Q6UW68 189 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 CCDC36Q8IYA8 594 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 OR8D4Q8NGM9 314 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 OR2T35Q8NGX2 323 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 OR5J2Q8NH18 312 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 ELP5Q8TE02 316 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 SLC25A44Q96H78 314 aaPredicted RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF681Q96N22 645 aa10.83□□□□□ -0.68
TRA2B-214ENST00000487615 URM1Q9BTM9 101 aaKnown RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 RANGRFQ9HD47 186 aaPredicted RBP10.83□□□□□ -0.68
TRA2B-214ENST00000487615 A0A0B4J2E0 115 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms