RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 SMR3AQ99954 134 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 USB1Q9BQ65 265 aaKnown RBP13.91□□□□□ -0.18
GABPA-203ENST00000487266 PRDM4Q9UKN5 801 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 RASD1Q9Y272 281 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 MAGED1Q9Y5V3 778 aaPredicted RBP13.91□□□□□ -0.18
GABPA-203ENST00000487266 CAPN7Q9Y6W3 813 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 PLCE1Q9P212 2302 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 C2CD3Q4AC94 2353 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 BBIP1A8MTZ0 92 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 M0R1B8 84 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 AIM2O14862 343 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 LYPD3O95274 346 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 BGLAPP02818 100 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 DANCRP0C864 163 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 HLA-DOBP13765 273 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 MPGP29372 298 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 CDH11P55287 796 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 IL1RL1Q01638 556 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 PGGHGQ32M88 737 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 COQ5Q5HYK3 327 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 ENTPD8Q5MY95 495 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 YTHDF3Q7Z739 585 aaKnown RBP13.9□□□□□ -0.18
GABPA-203ENST00000487266 PATL1Q86TB9 770 aaKnown RBP13.9□□□□□ -0.18
GABPA-203ENST00000487266 P2RY8Q86VZ1 359 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 WDFY1Q8IWB7 410 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 LRRC75A-AS1Q8N1F1 130 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 TMEM171Q8WVE6 324 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 Q96MF0 132 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 SELENONQ9NZV5 590 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 ALPK2Q86TB3 2170 aa13.9□□□□□ -0.18
GABPA-203ENST00000487266 HEATR1Q9H583 2144 aaKnown RBP13.9□□□□□ -0.18
GABPA-203ENST00000487266 TRIM64A6NGJ6 449 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 TRIM64BA6NI03 449 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 TRAF3IP2O43734 574 aaPredicted RBP13.89□□□□□ -0.19
GABPA-203ENST00000487266 SHOX2O60902 331 aaPredicted RBP13.89□□□□□ -0.19
GABPA-203ENST00000487266 KRT33AO76009 404 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 VAMP5O95183 116 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 ZNF43P17038 809 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 CDKN1AP38936 164 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 SHEQ5VZ18 495 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 OR7E24Q6IFN5 339 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 B3GLCTQ6Y288 498 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 SLC30A8Q8IWU4 369 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 CIARTQ8N365 385 aaPredicted RBP13.89□□□□□ -0.19
GABPA-203ENST00000487266 POMGNT2Q8NAT1 580 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 SLC26A7Q8TE54 656 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 ADAMTS16Q8TE57 1224 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 ZNF583Q96ND8 569 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 ECSITQ9BQ95 431 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 GSX2Q9BZM3 304 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 SLC17A5Q9NRA2 495 aa13.89□□□□□ -0.19
GABPA-203ENST00000487266 ZNF587BE7ETH6 402 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 KPNA4O00629 521 aaPredicted RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 CHP2O43745 196 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 OR2T1O43869 369 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 FMO6PO60774 539 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 SERPINI2O75830 405 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 ZNF432O94892 652 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 C8BP07358 591 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 NQO1P15559 274 aaKnown RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 CD40P25942 277 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 RPS4XP62701 263 aaKnown RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 TUBA1BP68363 451 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 TUBA4AP68366 448 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 INTS11Q5TA45 600 aaKnown RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 ZNF613Q6PF04 617 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 TUBA1AQ71U36 451 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 CCDC80Q76M96 950 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 C10orf53Q8N6V4 93 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 C1orf162Q8NEQ5 155 aaPredicted RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 OR1K1Q8NGR3 316 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 SMAP2Q8WU79 429 aaPredicted RBP13.88□□□□□ -0.19
GABPA-203ENST00000487266 OXGR1Q96P68 337 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 SLC7A7Q9UM01 511 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 B3GALT5Q9Y2C3 310 aa13.88□□□□□ -0.19
GABPA-203ENST00000487266 A0A096LPE4 126 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 A0A1W2PPZ6 126 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 FAM220BPB1ANY3 271 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 E7EQL1 145 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 ARHGEF9O43307 516 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 SEC14L2O76054 403 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 SEC24CP53992 1094 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 ROR2Q01974 943 aaKnown RBP13.87□□□□□ -0.19
GABPA-203ENST00000487266 POU3F1Q03052 451 aaPredicted RBP13.87□□□□□ -0.19
GABPA-203ENST00000487266 C1DQ13901 141 aaKnown RBP13.87□□□□□ -0.19
GABPA-203ENST00000487266 TBRG1Q3YBR2 411 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 LRRC23Q53EV4 343 aaPredicted RBP13.87□□□□□ -0.19
GABPA-203ENST00000487266 PHYHD1Q5SRE7 291 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 SWT1Q5T5J6 900 aaKnown RBP13.87□□□□□ -0.19
GABPA-203ENST00000487266 CARD17Q5XLA6 110 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 SLC22A25Q6T423 547 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 TMEM108Q6UXF1 575 aa13.87□□□□□ -0.19
GABPA-203ENST00000487266 Q71RC1 249 aaPredicted RBP13.87□□□□□ -0.19
GABPA-203ENST00000487266 CARM1Q86X55 608 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms