RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 TTC19Q6DKK2 380 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 KLC3Q6P597 504 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 PLXDC2Q6UX71 529 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SH2D5Q6ZV89 423 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 PLEKHM3Q6ZWE6 761 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 P4HA3Q7Z4N8 544 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CNEP1R1Q8N9A8 125 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 OR52B6Q8NGF0 335 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 OR52R1Q8NGF1 315 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 RDH11Q8TC12 318 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF675Q8TD23 568 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 KCTD4Q8WVF5 259 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TMBIM1Q969X1 311 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ATP6V1E2Q96A05 226 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TM4SF18Q96CE8 201 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 KLHL29Q96CT2 875 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CNRIP1Q96F85 164 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 PERPQ96FX8 193 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF681Q96N22 645 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SFXN2Q96NB2 322 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM111AQ96PZ2 611 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 BTBD9Q96Q07 612 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ERP44Q9BS26 406 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 MED18Q9BUE0 208 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 FAIM2Q9BWQ8 316 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 MRPL1Q9BYD6 325 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 MMP28Q9H239 520 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ELOVL6Q9H5J4 265 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 NOL11Q9H8H0 719 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 EVA1AQ9H8M9 152 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 UBTD1Q9HAC8 227 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 BRF2Q9HAW0 419 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SCRT2Q9NQ03 307 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SDHAF3Q9NRP4 125 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF701Q9NV72 531 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 NMRK1Q9NWW6 199 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CPSF2Q9P2I0 782 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 DKKL1Q9UK85 242 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 FBXL2Q9UKC9 423 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TMCO1Q9UM00 188 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 PLLPQ9Y342 182 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF175Q9Y473 711 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 FBN1P35555 2871 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 A0A096LPK6 155 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 B4DXG7 233 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 STX16-NPEPL1H3BU86 382 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 STX16O14662 325 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 FADS1O60427 444 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PLOD3O60568 738 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PMS2P2O95744 297 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PDYNP01213 254 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 AMBPP02760 352 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 RBP1P09455 135 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 IL12BP29460 328 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 KRT20P35900 424 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 ARL1P40616 181 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 MTNR1AP48039 350 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 SUCLG1P53597 346 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 NR1H2P55055 460 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PLTPP55058 493 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 RPS3AP61247 264 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 GNG11P61952 73 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 GUCY2DQ02846 1103 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 IFT88Q13099 833 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 CAPRIN1Q14444 709 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 GANABQ14697 944 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 GUSBP1Q15486 140 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 SGO1Q5FBB7 561 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 BEX5Q5H9J7 111 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 TECRLQ5HYJ1 363 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 OR5M10Q6IEU7 315 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 TUBA1AQ71U36 451 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF550Q7Z398 422 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 COMMD6Q7Z4G1 85 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PATL1Q86TB9 770 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 SATL1Q86VE3 508 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC44A2Q8IWA5 706 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF611Q8N823 705 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PTGR2Q8N8N7 351 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 FADS6Q8N9I5 356 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 OR2M3Q8NG83 312 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 OR4F6Q8NGB9 312 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 OR4K17Q8NGC6 315 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 FIG4Q92562 907 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 VSTM2LQ96N03 204 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 NAPGQ99747 312 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PIGQQ9BRB3 760 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 IFT27Q9BW83 186 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PINK1Q9BXM7 581 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 SHCBP1LQ9BZQ2 653 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 STMN4Q9H169 189 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 OPN3Q9H1Y3 402 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 OR10A4Q9H209 315 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 DPH5Q9H2P9 285 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 DSN1Q9H410 356 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PTGES2Q9H7Z7 377 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 RNF122Q9H9V4 155 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 FANCFQ9NPI8 374 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 TAS2R9Q9NYW1 312 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms