RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 DUSP7Q16829 419 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 SLC22A25Q6T423 547 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 CLEC9AQ6UXN8 241 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 H1FNTQ75WM6 255 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 DTX2Q86UW9 622 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 RANBP3LQ86VV4 465 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 OR10A6Q8NH74 314 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 RNF217Q8TC41 542 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 TRAF4Q9BUZ4 470 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 LINC00470Q9BZP3 86 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 ALG2Q9H553 416 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 SEC14L4Q9UDX3 406 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 LOC102725191A0A1B0GVB3 256 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 E7EQL1 145 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF587BE7ETH6 402 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 M0R082 166 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 FMO6PO60774 539 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 UPK3AO75631 287 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF432O94892 652 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 CDKN1AP38936 164 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 CDH12P55289 794 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 CLDN17P56750 224 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 SLC25A3Q00325 362 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 LGALS3BPQ08380 585 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 CYLC2Q14093 348 aaPredicted RBP16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 MFSD13AQ14CX5 517 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 SWT1Q5T5J6 900 aaKnown RBP16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 NANOGP8Q6NSW7 305 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 PATL1Q86TB9 770 aaKnown RBP16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF417Q8TAU3 575 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 POM121Q96HA1 1249 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF587Q96SQ5 575 aaPredicted RBP16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 EPYCQ99645 322 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 MCHR1Q99705 422 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 ARHGDIGQ99819 225 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 DHRS9Q9BPW9 319 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 NANOGQ9H9S0 305 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 OBP2BQ9NPH6 170 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 FGFR1OP2Q9NVK5 253 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF446Q9NWS9 450 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 KLHL14Q9P2G3 628 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 B3GAT1Q9P2W7 334 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 POU2F3Q9UKI9 436 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 RCE1Q9Y256 329 aa16.12■□□□□ 0.17
PRPF40A-209ENST00000486100 SMAD7O15105 426 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 OPN1SWP03999 348 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 HEXAP06865 529 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 HOXB4P17483 251 aaPredicted RBP16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 CBLP22681 906 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 PAX7P23759 505 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 TTKP33981 857 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 PCGF2P35227 344 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 GZMMP51124 257 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 LTBQ06643 244 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 SPOCK1Q08629 439 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 C1DQ13901 141 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 ETFDHQ16134 617 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 NRF1Q16656 503 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 TRMT5Q32P41 509 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 HIKESHIQ53FT3 197 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 INTS11Q5TA45 600 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 AGAP6Q5VW22 663 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF613Q6PF04 617 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 KLHL24Q6TFL4 600 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 Q71RC1 249 aaPredicted RBP16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 LINGO2Q7L985 606 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 ADPRHL1Q8NDY3 354 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 GPR32P1Q8NGA4 272 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 OR1K1Q8NGR3 316 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 SLC41A3Q96GZ6 507 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 SH3GL1Q99961 368 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 CORINQ9Y5Q5 1042 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 USF3Q68DE3 2245 aa16.11■□□□□ 0.17
PRPF40A-209ENST00000486100 MS4A18H0YCH9 400 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 RPL36A-HNRNPH2H7BZ11 118 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 M0R3H8 397 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 LY6G6DO95868 133 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 NPPAP01160 153 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 BGLAPP02818 100 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 VIMP08670 466 aaKnown RBP16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 KLF10Q13118 480 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 CLEC12BQ2HXU8 276 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 VMACQ2NL98 169 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 MS4A18Q3C1V0 323 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 TBRG1Q3YBR2 411 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 COQ5Q5HYK3 327 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 CGB2Q6NT52 195 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 HMBOX1Q6NT76 420 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 LINC00114Q6XXX2 140 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 ANKK1Q8NFD2 765 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 OR6T1Q8NGN1 323 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 MAGEE2Q8TD90 523 aaPredicted RBP16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 SLC26A7Q8TE54 656 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 BCL2L2Q92843 193 aaPredicted RBP16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 LRRC58Q96CX6 371 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF317Q96PQ6 595 aaPredicted RBP16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 ALKBH3Q96Q83 286 aaPredicted RBP16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 TMEM43Q9BTV4 400 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 FKRPQ9H9S5 495 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 SAR1AQ9NR31 198 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms