RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 BCL2L2Q92843 193 aaPredicted RBP14.95□□□□□ -0.02
SMC4-216ENST00000485645 KTI12Q96EK9 354 aaPredicted RBP14.95□□□□□ -0.02
SMC4-216ENST00000485645 KATNB1Q9BVA0 655 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 PTDSS2Q9BVG9 487 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 LINC00470Q9BZP3 86 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 ARPC4-TTLL3A0A0A6YYG9 625 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 HMGB1P1B2RPK0 211 aaPredicted RBP14.94□□□□□ -0.02
SMC4-216ENST00000485645 HAX1O00165 279 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 MRPL19P49406 292 aaKnown RBP14.94□□□□□ -0.02
SMC4-216ENST00000485645 CLDN17P56750 224 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 ROR2Q01974 943 aaKnown RBP14.94□□□□□ -0.02
SMC4-216ENST00000485645 MST1LQ2TV78 715 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 ANKRD16Q6P6B7 361 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 MAGEE2Q8TD90 523 aaPredicted RBP14.94□□□□□ -0.02
SMC4-216ENST00000485645 NANOS1Q8WY41 292 aaKnown RBP14.94□□□□□ -0.02
SMC4-216ENST00000485645 OXGR1Q96P68 337 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 KCNK17Q96T54 332 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 C12orf10Q9HB07 376 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 MOV10Q9HCE1 1003 aaKnown RBP14.94□□□□□ -0.02
SMC4-216ENST00000485645 TCF7L2Q9NQB0 619 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 FKBP7Q9Y680 259 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 CUBNO60494 3623 aa14.94□□□□□ -0.02
SMC4-216ENST00000485645 A0A096LPE4 126 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 A0A1W2PPZ6 126 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 NR5A2O00482 541 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 POLR3GO15318 223 aaPredicted RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 OR2T1O43869 369 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 SLC43A1O75387 559 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 LY6HO94772 140 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 HOXB9P17482 250 aaPredicted RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 USF1P22415 310 aaPredicted RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 PRKAR1BP31321 381 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 PDLIM4P50479 330 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 SH3BGRP55822 239 aaPredicted RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 SNRPD2P62316 118 aaKnown RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 TUBA1BP68363 451 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 TUBA4AP68366 448 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 C3orf36Q3SXR2 165 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 FAM69AQ5T7M9 428 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 CYB5R2Q6BCY4 276 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 C5orf46Q6UWT4 87 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 C6orf89Q6UWU4 347 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 TUBA1AQ71U36 451 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 LSMEM1Q8N8F7 131 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 ANKK1Q8NFD2 765 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 NFKBIDQ8NI38 313 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 C7orf26Q96N11 449 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 CA10Q9NS85 328 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 CRNNQ9UBG3 495 aaPredicted RBP14.93□□□□□ -0.02
SMC4-216ENST00000485645 CDC42EP3Q9UKI2 254 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 RCE1Q9Y256 329 aa14.93□□□□□ -0.02
SMC4-216ENST00000485645 B9A039 149 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 RPL36A-HNRNPH2H7BZ11 118 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 AIM2O14862 343 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 TGDSO95455 350 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 ARAFP10398 606 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 PPIBP23284 216 aaKnown RBP14.92□□□□□ -0.02
SMC4-216ENST00000485645 SERPINF1P36955 418 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 NAAAQ02083 359 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 C1DQ13901 141 aaKnown RBP14.92□□□□□ -0.02
SMC4-216ENST00000485645 LRIF1Q5T3J3 769 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 GCNT6Q5T4J0 391 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 REEP3Q6NUK4 255 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 BLOC1S3Q6QNY0 202 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 SLC46A3Q7Z3Q1 461 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 NET1Q7Z628 596 aaPredicted RBP14.92□□□□□ -0.02
SMC4-216ENST00000485645 KRT73Q86Y46 540 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 FAM169BQ8N8A8 192 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 DNAJA4Q8WW22 397 aaPredicted RBP14.92□□□□□ -0.02
SMC4-216ENST00000485645 SLC38A4Q969I6 547 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 TAAR8Q969N4 342 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 SORCS2Q96PQ0 1159 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 VRK1Q99986 396 aaPredicted RBP14.92□□□□□ -0.02
SMC4-216ENST00000485645 SPATA5L1Q9BVQ7 753 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 NELFAQ9H3P2 528 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 TMEM160Q9NX00 188 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 SLC25A37Q9NYZ2 338 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 CCDC167Q9P0B6 97 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 SLAMF8Q9P0V8 285 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 B3GAT1Q9P2W7 334 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 SEC14L4Q9UDX3 406 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 MXRA5Q9NR99 2828 aa14.92□□□□□ -0.02
SMC4-216ENST00000485645 A0A1B0GWA3 101 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 RNF212BA8MTL3 300 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 M0R082 166 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 NDUFS8O00217 210 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 FZD7O75084 574 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 SASH3O75995 380 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 PDE5AO76074 875 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 ZNF432O94892 652 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 OR4A8P0C604 315 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 CECR9P0C854 216 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 GRPRP30550 384 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 LSM11P83369 360 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMC4-216ENST00000485645 ARF1P84077 181 aaKnown RBP14.91□□□□□ -0.02
SMC4-216ENST00000485645 CDK6Q00534 326 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 IL1RL1Q01638 556 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 ALG10BQ5I7T1 473 aa14.91□□□□□ -0.02
SMC4-216ENST00000485645 DHRS4L2Q6PKH6 230 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms