RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 PLGP00747 810 aaPredicted RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 MT-ND2P03891 347 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CPN1P15169 458 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CD36P16671 472 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ALOX12P18054 663 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PTX3P26022 381 aaPredicted RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 APEX1P27695 318 aaKnown RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 S100A5P33763 92 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CLK3P49761 638 aaKnown RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ARHGDIAP52565 204 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 EFNA4P52798 201 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 VBP1P61758 197 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 COPZ1P61923 177 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 NCS1P62166 190 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 GPR50Q13585 617 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 IRF3Q14653 427 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ELAVL1Q15717 326 aaKnown RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PFKFB4Q16877 469 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 TIMM50Q3ZCQ8 353 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ATP6AP1LQ52LC2 224 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 EIPR1Q53HC9 387 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 YIF1BQ5BJH7 314 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 TOR2AQ5JU69 321 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CDKL4Q5MAI5 379 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 DCST1Q5T197 706 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 TIGD3Q6B0B8 471 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 SIGIRRQ6IA17 410 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ERICH5Q6P6B1 374 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CYP20A1Q6UW02 462 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CCBE1Q6UXH8 406 aaPredicted RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 GPRIN3Q6ZVF9 776 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 RPS27LQ71UM5 84 aaKnown RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 DTX2Q86UW9 622 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CYP4Z1Q86W10 505 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PARP16Q8N5Y8 322 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 OR2T11Q8NH01 316 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 OR8K3Q8NH51 312 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 OR14A16Q8NHC5 309 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 OR14L1PQ8NHC6 308 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 RPL3LQ92901 407 aaKnown RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 MYDGFQ969H8 173 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 TMCO6Q96DC7 493 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ST6GAL2Q96JF0 529 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 RNF170Q96K19 258 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PRAP1Q96NZ9 151 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 RACGAP1Q9H0H5 632 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 SLITRK2Q9H156 845 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 MYOZ1Q9NP98 299 aaPredicted RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 IL1RAPQ9NPH3 570 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PRTFDC1Q9NRG1 225 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 TMEM184CQ9NVA4 438 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 TAS2R13Q9NYV9 303 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 NUDT4Q9NZJ9 180 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 CLCF1Q9UBD9 225 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PSORS1C1Q9UIG5 152 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ZNF223Q9UK11 482 aaPredicted RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 ZNF221Q9UK13 617 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 SAMD4AQ9UPU9 718 aaKnown RBP5.63□□□□□ -1.51
CAPN13-206ENST00000485248 DLGAP4Q9Y2H0 992 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 LYVE1Q9Y5Y7 322 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 PRSS21Q9Y6M0 314 aa5.63□□□□□ -1.51
CAPN13-206ENST00000485248 KCNE1BA0A087WTH5 132 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 A0A096LPI6 279 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 TRBV5-4A0A0C4DH59 114 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 IGKV1-8A0A0C4DH67 115 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 CENPXA8MT69 81 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 PTGES3LE9PB15 166 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 SLC28A1O00337 649 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 GNGT2O14610 69 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 XPNPEP2O43895 674 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 GALR3O60755 368 aaPredicted RBP5.62□□□□□ -1.51
CAPN13-206ENST00000485248 GUCY1B2O75343 617 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 WBP4O75554 376 aaKnown RBP5.62□□□□□ -1.51
CAPN13-206ENST00000485248 SEMA3DO95025 777 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 LRATO95237 230 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 CBX7O95931 251 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 GOT2P00505 430 aaKnown RBP5.62□□□□□ -1.51
CAPN13-206ENST00000485248 CATP04040 527 aaKnown RBP5.62□□□□□ -1.51
CAPN13-206ENST00000485248 AMY2AP04746 511 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 PEPDP12955 493 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 OSMP13725 252 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 COX7A2P14406 83 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 PRKCAP17252 672 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 AMY2BP19961 511 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 PTNP21246 168 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 PRPH2P23942 346 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 IL32P24001 234 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 GCH1P30793 250 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 RRM2P31350 389 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 CCR7P32248 378 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 RCVRNP35243 200 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 MTNR1BP49286 362 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 DAPP51397 102 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 ZNF140P52738 457 aaPredicted RBP5.62□□□□□ -1.51
CAPN13-206ENST00000485248 IL5RAQ01344 420 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 PIGFQ07326 219 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 STX4Q12846 297 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 DOC2AQ14183 400 aa5.62□□□□□ -1.51
CAPN13-206ENST00000485248 ARHGAP19Q14CB8 494 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms