RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 DHX57Q6P158 1386 aaKnown RBP1.44□□□□□ -2.18
VPS50-216ENST00000484954 MN1Q10571 1320 aaPredicted RBP1.43□□□□□ -2.18
VPS50-216ENST00000484954 DOCK8Q8NF50 2099 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 A0A1B0GVX0 72 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 C7orf66A4D0T2 115 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 GSAPA4D1B5 854 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 ZSCAN12O43309 604 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 OR1F1O43749 312 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 TM7SF2O76062 418 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 MPZL1O95297 269 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 BAG2O95816 211 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 IGHG4P01861 327 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 ADRA2AP08913 450 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 CYP2F1P24903 491 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 PSMA2P25787 234 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 GSSP48637 474 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 CAMLGP49069 296 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 HMGCS1Q01581 520 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 ACVR1Q04771 509 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 PJVKQ0ZLH3 352 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 FZD2Q14332 565 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 PRSS8Q16651 343 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 VAX1Q5SQQ9 334 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 RAB12Q6IQ22 244 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 C1orf94Q6P1W5 598 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 NLRP9Q7RTR0 991 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 LINC00304Q8N9R0 145 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 EXOSC8Q96B26 276 aaKnown RBP1.43□□□□□ -2.18
VPS50-216ENST00000484954 SEC22AQ96IW7 307 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 OR10C1Q96KK4 312 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 FAM111AQ96PZ2 611 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 NIPSNAP3BQ9BS92 247 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 TMEM117Q9H0C3 514 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 HSD3B7Q9H2F3 369 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 DPH5Q9H2P9 285 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 IL36GQ9NZH8 169 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 OR12D3Q9UGF7 316 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 MOSPD1Q9UJG1 213 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 KNSTRNQ9Y448 316 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 CARMIL3Q8ND23 1372 aa1.43□□□□□ -2.18
VPS50-216ENST00000484954 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.43□□□□□ -2.18
VPS50-216ENST00000484954 SLC31A2O15432 143 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 UGT1A9O60656 530 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 SRP72O76094 671 aaKnown RBP1.42□□□□□ -2.18
VPS50-216ENST00000484954 LRATO95237 230 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 IGKV1D-16P01601 117 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 POU2F1P14859 743 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 P2RY1P47900 373 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 ACADVLP49748 655 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 GPM6AP51674 278 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 PKNOX1P55347 436 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 COX19Q49B96 90 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 CARD16Q5EG05 197 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 SAMD4BQ5PRF9 694 aaKnown RBP1.42□□□□□ -2.18
VPS50-216ENST00000484954 OR52E8Q6IFG1 317 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 KCNIP4Q6PIL6 250 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 FAM92BQ6ZTR7 304 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 GET4Q7L5D6 327 aaPredicted RBP1.42□□□□□ -2.18
VPS50-216ENST00000484954 ZNF546Q86UE3 836 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 CALHM3Q86XJ0 350 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 ZNF619Q8N2I2 560 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 OSR2Q8N2R0 312 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 CLDN19Q8N6F1 224 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 STXBP6Q8NFX7 210 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 CD300LFQ8TDQ1 290 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 SMARCD2Q92925 531 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 NEURL3Q96EH8 262 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 C4orf36Q96KX1 117 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 OR2A5Q96R48 311 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 RIT2Q99578 217 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 EDEM2Q9BV94 578 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 CAPS2Q9BXY5 557 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 DBNDD1Q9H9R9 158 aa1.42□□□□□ -2.18
VPS50-216ENST00000484954 PIN4Q9Y237 131 aaKnown RBP1.42□□□□□ -2.18
VPS50-216ENST00000484954 NFASCO94856 1347 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 RNF103-CHMP3A0A140T963 221 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 PRSS37A4D1T9 235 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 C12orf71A8MTZ7 269 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 NPIPA7E9PJI5 369 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 F8WDY8 70 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 TAPBPO15533 448 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 PFKFB2O60825 505 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 ALDOBP05062 364 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 NPIPA8P0DM63 369 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 MMP11P24347 488 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 MEF2BQ02080 365 aaPredicted RBP1.41□□□□□ -2.18
VPS50-216ENST00000484954 PDIA2Q13087 525 aaKnown RBP1.41□□□□□ -2.18
VPS50-216ENST00000484954 SLC15A2Q16348 729 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 MICBQ29980 383 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 FBXW9Q5XUX1 488 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 PGAP1Q75T13 922 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 LRP11Q86VZ4 500 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 UBALD2Q8IYN6 164 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 CLEC4FQ8N1N0 589 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 OR2G3Q8NGZ4 309 aa1.41□□□□□ -2.18
VPS50-216ENST00000484954 ACOT11Q8WXI4 607 aaPredicted RBP1.41□□□□□ -2.18
VPS50-216ENST00000484954 RBMXL1Q96E39 390 aaKnown RBP1.41□□□□□ -2.18
VPS50-216ENST00000484954 RIOK2Q9BVS4 552 aaKnown RBP1.41□□□□□ -2.18
VPS50-216ENST00000484954 RBKSQ9H477 322 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms