RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ZNF607Q96SK3 696 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 NPAS1Q99742 590 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM204Q9BSN7 226 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 QRSL1Q9H0R6 528 aaKnown RBP5.45□□□□□ -1.54
PTCD3-215ENST00000484203 VIPAS39Q9H9C1 493 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 UBTD1Q9HAC8 227 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 C12orf10Q9HB07 376 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 BARX1Q9HBU1 254 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-215ENST00000484203 BCL2L10Q9HD36 194 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 A4GALTQ9NPC4 353 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 OBP2BQ9NPH6 170 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 CTPS2Q9NRF8 586 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 TAS2R16Q9NYV7 291 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 SELENONQ9NZV5 590 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 ASH2LQ9UBL3 628 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 MALT1Q9UDY8 824 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 KCNE5Q9UJ90 142 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 TMED7Q9Y3B3 224 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 GMEB1Q9Y692 573 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 PMF1-BGLAPU3KQ54 211 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 HIVEP2P31629 2446 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 DSPPQ9NZW4 1301 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 ROS1P08922 2347 aa5.45□□□□□ -1.54
PTCD3-215ENST00000484203 CIB4A0PJX0 185 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 OR5H1A6NKK0 313 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CCT8L1PA6NM43 557 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF814B7Z6K7 855 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CLIC1O00299 241 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 GSTA4O15217 222 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 OR2T1O43869 369 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 PGM3O95394 542 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 C8BP07358 591 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CHRM4P08173 479 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 INHBBP09529 407 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 PNMTP11086 282 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 NCF2P19878 526 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 COX5AP20674 150 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 PTAFRP25105 342 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 TACR3P29371 465 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 PRKAR1BP31321 381 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 IDUAP35475 653 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 PRRC2AP48634 2157 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CASP9P55211 416 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 OR2B6P58173 313 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 RPS4XP62701 263 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 FUT5Q11128 374 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 FOXD4Q12950 439 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CAPRIN1Q14444 709 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 PPA1Q15181 289 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 RGNQ15493 299 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 TAB1Q15750 504 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 SYPL1Q16563 259 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 SLC9B1Q4ZJI4 515 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 Q5PR19 223 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 NCMAPQ5T1S8 102 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 MRPL2Q5T653 305 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 METTL21CQ5VZV1 264 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 REEP3Q6NUK4 255 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 KLHL24Q6TFL4 600 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 NUFIP2Q7Z417 695 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 SLC30A8Q8IWU4 369 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CLEC4FQ8N1N0 589 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 ANKFN1Q8N957 763 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 SLC38A5Q8WUX1 472 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 DNAJA4Q8WW22 397 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 CNOT9Q92600 299 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 GTF2H4Q92759 462 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 DACT3Q96B18 629 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM45BQ96B21 275 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 ZG16BQ96DA0 208 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 INPP5KQ9BT40 448 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 DLL4Q9NR61 685 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF701Q9NV72 531 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 INTS9Q9NV88 658 aaKnown RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 UPB1Q9UBR1 384 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 RPS6KB2Q9UBS0 482 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 OSGIN1Q9UJX0 560 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 FBXO9Q9UK97 447 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-215ENST00000484203 SLC13A4Q9UKG4 626 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 RASD1Q9Y272 281 aa5.44□□□□□ -1.54
PTCD3-215ENST00000484203 TLN2Q9Y4G6 2542 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CENPVL1A0A0U1RR11 272 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 A0A1W2PP18 115 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 LIPT2A6NK58 231 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 AQP7P3A6NL99 342 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF716A6NP11 495 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 VSTM5A8MXK1 200 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CLOCKO15516 846 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 AKAP8O43823 692 aaKnown RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ENTPD5O75356 428 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 KRT33AO76009 404 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 AHSA1O95433 338 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 PLA2G1BP04054 148 aaKnown RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 BCHEP06276 602 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ETFAP13804 333 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SLC6A2P23975 617 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 LOXP28300 417 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 GTF2E2P29084 291 aaKnown RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 MPGP29372 298 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CDKN2CP42773 168 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms