RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CDKN2CP42773 168 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 ALDH3B1P43353 468 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 CLDN17P56750 224 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 POU3F1Q03052 451 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 SNTB2Q13425 540 aaKnown RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 DAG1Q14118 895 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 MAD2L1BPQ15013 274 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 GSTA3Q16772 222 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 FAHD2BQ6P2I3 314 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 UGT2A3Q6UWM9 527 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 LRRC74BQ6ZQY2 392 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 RNF130Q86XS8 419 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 VRK2Q86Y07 508 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 CMIPQ8IY22 773 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 IFT20Q8IY31 132 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 ZMYND19Q96E35 227 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 FAHD2AQ96GK7 314 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 ZNF317Q96PQ6 595 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 TRNT1Q96Q11 434 aaKnown RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 PTDSS2Q9BVG9 487 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 AKTIPQ9H8T0 292 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 MTHFD2LQ9H903 347 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 DYNLRB1Q9NP97 96 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 ZNF275Q9NSD4 429 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 ZNF224Q9NZL3 707 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 REV1Q9UBZ9 1251 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 FBXO9Q9UK97 447 aaPredicted RBP11.06□□□□□ -0.64
UBR4-213ENST00000483922 PCDHB14Q9Y5E9 798 aa11.06□□□□□ -0.64
UBR4-213ENST00000483922 A8MVM7 634 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 RP2O75695 350 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 NCR1O76036 304 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 EPHA1P21709 976 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 ARR3P36575 388 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
UBR4-213ENST00000483922 NPRL3Q12980 569 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 CEACAM16Q2WEN9 425 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 PDLIM3Q53GG5 364 aaPredicted RBP11.05□□□□□ -0.64
UBR4-213ENST00000483922 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 C1orf140Q5VVS0 124 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 NHLRC1Q6VVB1 395 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 ZNF836Q6ZNA1 936 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 CNPY4Q8N129 248 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 CLIP4Q8N3C7 705 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 ZNF418Q8TF45 676 aaPredicted RBP11.05□□□□□ -0.64
UBR4-213ENST00000483922 MRPL24Q96A35 216 aaKnown RBP11.05□□□□□ -0.64
UBR4-213ENST00000483922 PPP1R36Q96LQ0 422 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 SLC35A5Q9BS91 424 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 TMPRSS13Q9BYE2 586 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 C20orf27Q9GZN8 174 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 CRLF2Q9HC73 371 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 MKS1Q9NXB0 559 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 USP22Q9UPT9 525 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 CMAHPQ9Y471 501 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
UBR4-213ENST00000483922 TRIM77I1YAP6 450 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 SYNGR3O43761 229 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 SPAG7O75391 227 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 VAMP5O95183 116 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 HLA-HP01893 362 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 PNMTP11086 282 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 ZNF14P17017 642 aaPredicted RBP11.04□□□□□ -0.64
UBR4-213ENST00000483922 ADRA2CP18825 462 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 ACHEP22303 614 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 EVX1P49640 407 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 MVDP53602 400 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 AQP5P55064 265 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 FXNQ16595 210 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 SLC9B1Q4ZJI4 515 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 PRAMEF8Q5VWM4 474 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 PRAMEF7Q5VXH5 474 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 TMEM123Q8N131 208 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 CADM2Q8N3J6 435 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
UBR4-213ENST00000483922 ANKK1Q8NFD2 765 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 KIF18AQ8NI77 898 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 RDH5Q92781 318 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 APOPT1Q96IL0 206 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 SYT3Q9BQG1 590 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 ZNF747Q9BV97 191 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 SLC6A13Q9NSD5 602 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 NOP53Q9NZM5 478 aaKnown RBP11.04□□□□□ -0.64
UBR4-213ENST00000483922 FZR1Q9UM11 496 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 RASD1Q9Y272 281 aa11.04□□□□□ -0.64
UBR4-213ENST00000483922 FZD7O75084 574 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 DEAF1O75398 565 aaPredicted RBP11.03□□□□□ -0.64
UBR4-213ENST00000483922 GSNP06396 782 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 ERCC1P07992 297 aaPredicted RBP11.03□□□□□ -0.64
UBR4-213ENST00000483922 SAGP10523 405 aaPredicted RBP11.03□□□□□ -0.64
UBR4-213ENST00000483922 NAT2P11245 290 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 IL7RP16871 459 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 PCMT1P22061 227 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 IL12AP29459 219 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 MAGEB1P43366 347 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 SH3BGRP55822 239 aaPredicted RBP11.03□□□□□ -0.64
UBR4-213ENST00000483922 TMEM33P57088 247 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 HOXC5Q00444 222 aa11.03□□□□□ -0.64
UBR4-213ENST00000483922 PIGFQ07326 219 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms