RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 SLC37A3Q8NCC5 494 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 FAM83FQ8NEG4 500 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 OR52E2Q8NGJ4 325 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 SLC25A43Q8WUT9 341 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 HIST1H2ACQ93077 130 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 TMIGD2Q96BF3 282 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 RASD2Q96D21 266 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 PLEKHA8Q96JA3 519 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 Q96M85 177 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 TSPAN32Q96QS1 320 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 TEX12Q9BXU0 123 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 PRRG3Q9BZD7 231 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 FN3KQ9H479 309 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 MED20Q9H944 212 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 BATF3Q9NR55 127 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 MRPS18AQ9NVS2 196 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 BOKQ9UMX3 212 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 SLC6A5Q9Y345 797 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CNTRLQ7Z7A1 2325 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 MED12Q93074 2177 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 TEX13CA0A0J9YWL9 993 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CCDC182A6NF36 153 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 EFCAB10A6NFE3 127 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF814B7Z6K7 855 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 PRODHO43272 600 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 RGS10O43665 173 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 IDH3BO43837 385 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 MRPS14O60783 128 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 HPNP05981 417 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 STSP08842 583 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CELA3AP09093 270 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ADORA3P0DMS8 318 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 PIPP12273 146 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 APEHP13798 732 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CD46P15529 392 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 JUNBP17275 347 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 KLK2P20151 261 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 SLC2A5P22732 501 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 FKBP2P26885 142 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 GDF1P27539 372 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 C21orf33P30042 268 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 SFTPDP35247 375 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CDKN2AP42771 156 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 MAP2K4P45985 399 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 MEOX1P50221 254 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 TNFSF10P50591 281 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 NR1H2P55055 460 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 RAC1P63000 192 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ARG2P78540 354 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 EMX1Q04741 257 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ST3GAL4Q11206 333 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 IRF3Q14653 427 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 MFSD13AQ14CX5 517 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF239Q16600 458 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 HYAL4Q2M3T9 481 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.07□□□□□ -0.963e-6■□□□□ 10.8
HDAC6-226ENST00000483656 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF766Q5HY98 468 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 WIPI1Q5MNZ9 446 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 RAET1LQ5VY80 246 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 NXNL2Q5VZ03 156 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 NIPAL3Q6P499 406 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 PLBD1Q6P4A8 553 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 H1FNTQ75WM6 255 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 PRSS48Q7RTY5 328 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 WDFY1Q8IWB7 410 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 SPACA3Q8IXA5 215 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 KDM8Q8N371 416 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 TMEM251Q8N6I4 163 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 EXD3Q8N9H8 876 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CYB561A3Q8NBI2 242 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 NPEPL1Q8NDH3 523 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 OR4K13Q8NH42 304 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZPLD1Q8TCW7 415 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 LGALS12Q96DT0 336 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 C5orf34Q96MH7 638 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 OR5B2Q96R09 309 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 PIGQQ9BRB3 760 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 COPS4Q9BT78 406 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ASPNQ9BXN1 380 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 TTTY12Q9BZ98 90 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF703Q9H7S9 590 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CHST11Q9NPF2 352 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ALKBH4Q9NXW9 302 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CNOT2Q9NZN8 540 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 KLHL21Q9UJP4 597 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF346Q9UL40 294 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 KLF13Q9Y2Y9 288 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 HDGFL3Q9Y3E1 203 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 RPL36Q9Y3U8 105 aaKnown RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 PCDHGB1Q9Y5G3 927 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 CORINQ9Y5Q5 1042 aa9.07□□□□□ -0.96
HDAC6-226ENST00000483656 SPIN1Q9Y657 262 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-226ENST00000483656 APC2O95996 2303 aa9.06□□□□□ -0.96
HDAC6-226ENST00000483656 A0A0J9YW62 118 aa9.06□□□□□ -0.96
HDAC6-226ENST00000483656 OR6C68A6NDL8 312 aa9.06□□□□□ -0.96
HDAC6-226ENST00000483656 RIIAD1A6NNX1 92 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms