RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 UBE2J2Q8N2K1 259 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 EIF4E3Q8N5X7 224 aaKnown RBP9.53□□□□□ -0.88
APTX-225ENST00000482687 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 UXS1Q8NBZ7 420 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 OR10G2Q8NGC3 310 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 ST8SIA2Q92186 375 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 MND1Q9BWT6 205 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 ZNF436Q9C0F3 470 aaPredicted RBP9.53□□□□□ -0.88
APTX-225ENST00000482687 NXF5Q9H1B4 397 aaKnown RBP9.53□□□□□ -0.88
APTX-225ENST00000482687 SAV1Q9H4B6 383 aaPredicted RBP9.53□□□□□ -0.88
APTX-225ENST00000482687 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
APTX-225ENST00000482687 Q9N2J8 555 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 CLN6Q9NWW5 311 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 TAS2R16Q9NYV7 291 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 PRODH2Q9UF12 536 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 GPN3Q9UHW5 284 aaPredicted RBP9.53□□□□□ -0.88
APTX-225ENST00000482687 CBLCQ9ULV8 474 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 A4GNTQ9UNA3 340 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 SLC9A8Q9Y2E8 581 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 WDFY3Q8IZQ1 3526 aa9.53□□□□□ -0.88
APTX-225ENST00000482687 IGLV3-12A0A075B6K2 115 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 BRINP1O60477 761 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 IGKV3-11P04433 115 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 DBIP07108 87 aaKnown RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 H1F0P07305 194 aaKnown RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 ADRA2AP08913 450 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 H2AFB1P0C5Y9 115 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 H2AFB2P0C5Z0 115 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 GAAP10253 952 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 PRG2P13727 222 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 PRKAR1BP31321 381 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 ZNF81P51508 661 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 RGS8P57771 180 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 EEF1A1P68104 462 aaKnown RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 SEC23BQ15437 767 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 SPHARQ15513 63 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 ETFDHQ16134 617 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 FAM209BQ5JX69 171 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 MRPL2Q5T653 305 aaKnown RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 RGS7BPQ6MZT1 257 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 CNIH2Q6PI25 160 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 ZNF730Q6ZMV8 503 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 C16orf47Q6ZP98 133 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 Q6ZPB1 254 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 RAB11FIP2Q7L804 512 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 MEX3DQ86XN8 651 aaKnown RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 C9orf40Q8IXQ3 194 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 LILRB2Q8N423 598 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 DEFB124Q8NES8 71 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 OR8D4Q8NGM9 314 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 OR14A16Q8NHC5 309 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 SLC22A8Q8TCC7 542 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 ERMAPQ96PL5 475 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 FEVQ99581 238 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 SPSB2Q99619 263 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 CRB3Q9BUF7 120 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 SAP130Q9H0E3 1048 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 B3GAT2Q9NPZ5 323 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 TXNL4BQ9NX01 149 aaKnown RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 AKAP7Q9P0M2 348 aaPredicted RBP9.52□□□□□ -0.89
APTX-225ENST00000482687 SCP2D1Q9UJQ7 156 aa9.52□□□□□ -0.89
APTX-225ENST00000482687 MEIKINA0A087WXM9 373 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 C2orf92A0A1B0GVN3 265 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 A0A1W2PNU3 283 aaPredicted RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 VSTM2BA6NLU5 285 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 LINC01387J3KSC0 135 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 DNASE2O00115 360 aaPredicted RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 APOL3O95236 402 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 MT-CO3P00414 261 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 AK1P00568 194 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 KLK3P07288 261 aaPredicted RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 FGF2P09038 288 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 RPS4Y1P22090 263 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 APEX1P27695 318 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 IDH2P48735 452 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 INPP1P49441 399 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 NR0B1P51843 470 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 AGFG1P52594 562 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
APTX-225ENST00000482687 CAMK2DQ13557 499 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 DOC2BQ14184 412 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 TRIP6Q15654 476 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 ISXQ2M1V0 245 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 NDUFAF6Q330K2 333 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 STPG1Q5TH74 334 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 GATSQ8NAP1 163 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 OR1N1Q8NGS0 311 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 THAP3Q8WTV1 239 aaPredicted RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 METTL21AQ8WXB1 218 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 DAZLQ92904 295 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 GTPBP3Q969Y2 492 aaKnown RBP9.51□□□□□ -0.89
APTX-225ENST00000482687 SLC46A1Q96NT5 459 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 MCHR1Q99705 422 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 CDC6Q99741 560 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 NIPSNAP1Q9BPW8 284 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 FNDC11Q9BVV2 318 aa9.51□□□□□ -0.89
APTX-225ENST00000482687 STRADBQ9C0K7 418 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms