RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CCDC80Q76M96 950 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 ADPRHL1Q8NDY3 354 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 KBTBD8Q8NFY9 601 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 OR52N5Q8NH56 324 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF417Q8TAU3 575 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 RNF217Q8TC41 542 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 RASSF5Q8WWW0 418 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF587Q96SQ5 575 aaPredicted RBP14.94□□□□□ -0.02
HSPG2-209ENST00000480900 MCHR1Q99705 422 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 TMEM43Q9BTV4 400 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 B3GAT1Q9P2W7 334 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 RCE1Q9Y256 329 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 AMDHD2Q9Y303 409 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 CORINQ9Y5Q5 1042 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 CSPG4Q6UVK1 2322 aa14.94□□□□□ -0.02
HSPG2-209ENST00000480900 NAV3Q8IVL0 2385 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 LOC102725191A0A1B0GVB3 256 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 KRT33AO76009 404 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF43P17038 809 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 PTAFRP25105 342 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 GRPRP30550 384 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 SELENOPP49908 381 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 CDH12P55289 794 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 NPTX1Q15818 432 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 NIPAL3Q6P499 406 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 ERICH5Q6P6B1 374 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 TMEM108Q6UXF1 575 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 OR6T1Q8NGN1 323 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 SLC26A7Q8TE54 656 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 PERPQ96FX8 193 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 SLC41A3Q96GZ6 507 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 BOD1Q96IK1 185 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 RADILQ96JH8 1075 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 LINC00470Q9BZP3 86 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 SLC17A5Q9NRA2 495 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 GID8Q9NWU2 228 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 SEC14L4Q9UDX3 406 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 MGAT4BQ9UQ53 548 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 MAGED1Q9Y5V3 778 aaPredicted RBP14.93□□□□□ -0.02
HSPG2-209ENST00000480900 VPS13CQ709C8 3753 aa14.93□□□□□ -0.02
HSPG2-209ENST00000480900 NIPBLQ6KC79 2804 aaeCLIP14.92□□□□□ -0.02
HSPG2-209ENST00000480900 LOC100653049A0A140TA62 436 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 SHISA9B4DS77 424 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF587BE7ETH6 402 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ABCD4O14678 606 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 CHP2O43745 196 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 KRT34O76011 436 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 BGLAPP02818 100 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 DANCRP0C864 163 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 PTH2RP49190 550 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 CRYBA2P53672 197 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 RIPPLY3P57055 190 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 VEZF1Q14119 521 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 KDM8Q8N371 416 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 SCAIQ8N9R8 606 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 WDR31Q8NA23 367 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 NEUROG1Q92886 237 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ASPNQ9BXN1 380 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 PCDHAC1Q9H158 963 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF701Q9NV72 531 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ARMCX1Q9P291 453 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 LAMP3Q9UQV4 416 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ARFGEF3Q5TH69 2177 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 NSD1Q96L73 2696 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-209ENST00000480900 ZANQ9Y493 2812 aa14.92□□□□□ -0.02
HSPG2-209ENST00000480900 A0A1W2PR80 420 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 CPSF4LA6NMK7 179 aaKnown RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 AKAP8O43823 692 aaKnown RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF432O94892 652 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 CD40P25942 277 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF83P51522 516 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 CDH11P55287 796 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 CLDN17P56750 224 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 RPS4XP62701 263 aaKnown RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 C1DQ13901 141 aaKnown RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 ENTPD8Q5MY95 495 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 KLHL24Q6TFL4 600 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 LINC00114Q6XXX2 140 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 ANKK1Q8NFD2 765 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 OR4D11Q8NGI4 311 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 RP9Q8TA86 221 aaKnown RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 VANGL1Q8TAA9 524 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 SMAP2Q8WU79 429 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 PROX1Q92786 737 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 ZNF583Q96ND8 569 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 ALKBH3Q96Q83 286 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-209ENST00000480900 OBP2BQ9NPH6 170 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 NF1P21359 2839 aa14.91□□□□□ -0.02
HSPG2-209ENST00000480900 TRAPPC13A5PLN9 417 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 FAM220BPB1ANY3 271 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 TRAF3IP2O43734 574 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-209ENST00000480900 SLC43A1O75387 559 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 LYPD3O95274 346 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 WNT11O96014 354 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 MT-ATP6P00846 226 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 SOD3P08294 240 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 NQO1P15559 274 aaKnown RBP14.9□□□□□ -0.02
HSPG2-209ENST00000480900 CBLP22681 906 aa14.9□□□□□ -0.02
HSPG2-209ENST00000480900 SH3BGRP55822 239 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-209ENST00000480900 PRPS1P60891 318 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms