RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ROR2Q01974 943 aaKnown RBP13.29□□□□□ -0.28
LIMS3-203ENST00000480744 LOXL1Q08397 574 aaPredicted RBP13.29□□□□□ -0.28
LIMS3-203ENST00000480744 C1DQ13901 141 aaKnown RBP13.29□□□□□ -0.28
LIMS3-203ENST00000480744 CARTPTQ16568 116 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 GCNT6Q5T4J0 391 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 VHLLQ6RSH7 139 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 RNF217Q8TC41 542 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 C10orf105Q8TEF2 133 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 NANOS1Q8WY41 292 aaKnown RBP13.29□□□□□ -0.28
LIMS3-203ENST00000480744 BCL2L2Q92843 193 aaPredicted RBP13.29□□□□□ -0.28
LIMS3-203ENST00000480744 TCF7L2Q9NQB0 619 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 SEC14L4Q9UDX3 406 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 FKBP7Q9Y680 259 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 FBN1P35555 2871 aaKnown RBP13.29□□□□□ -0.28
LIMS3-203ENST00000480744 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 SLC43A1O75387 559 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 F12P00748 615 aaPredicted RBP13.28□□□□□ -0.28
LIMS3-203ENST00000480744 BMP2P12643 396 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 CBLP22681 906 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 EGR4Q05215 589 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 ANKRD16Q6P6B7 361 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 SLC46A3Q7Z3Q1 461 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 SLC38A4Q969I6 547 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 SLC35B4Q969S0 331 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 KCNK17Q96T54 332 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 VRK1Q99986 396 aaPredicted RBP13.28□□□□□ -0.28
LIMS3-203ENST00000480744 LINC00470Q9BZP3 86 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 INTS9Q9NV88 658 aaKnown RBP13.28□□□□□ -0.28
LIMS3-203ENST00000480744 SLC25A37Q9NYZ2 338 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 CCDC167Q9P0B6 97 aa13.28□□□□□ -0.28
LIMS3-203ENST00000480744 ARPC4-TTLL3A0A0A6YYG9 625 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 A0A1B0GWA3 101 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 RNF212BA8MTL3 300 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 M0R082 166 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 AIM2O14862 343 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 CECR9P0C854 216 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ARAFP10398 606 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ETS2P15036 469 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF16P17020 682 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-203ENST00000480744 HOXB9P17482 250 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-203ENST00000480744 HTR2AP28223 471 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 GRPRP30550 384 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 PRKAR1BP31321 381 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SERPINF1P36955 418 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 PDLIM4P50479 330 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SH3BGRP55822 239 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-203ENST00000480744 NCALDP61601 193 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ARF1P84077 181 aaKnown RBP13.27□□□□□ -0.29
LIMS3-203ENST00000480744 VLDLRP98155 873 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 NAAAQ02083 359 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 GGTLC2Q14390 218 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SWI5Q1ZZU3 235 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 MST1LQ2TV78 715 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 KRT73Q86Y46 540 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 GPR137CQ8N3F9 429 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ANKS4BQ8N8V4 417 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF417Q8TAU3 575 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 LRRC8CQ8TDW0 803 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 PROX1Q92786 737 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 TAAR8Q969N4 342 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SPDL1Q96EA4 605 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 BOD1Q96IK1 185 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 C7orf26Q96N11 449 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 OXGR1Q96P68 337 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SORCS2Q96PQ0 1159 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF587Q96SQ5 575 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-203ENST00000480744 EBF4Q9BQW3 602 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 KATNB1Q9BVA0 655 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
LIMS3-203ENST00000480744 PRR14Q9BWN1 585 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 CA10Q9NS85 328 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 SLAMF8Q9P0V8 285 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 RCE1Q9Y256 329 aa13.27□□□□□ -0.29
LIMS3-203ENST00000480744 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 OR2T1O43869 369 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 OR4A8P0C604 315 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 USF1P22415 310 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-203ENST00000480744 PPIBP23284 216 aaKnown RBP13.26□□□□□ -0.29
LIMS3-203ENST00000480744 CAPZA2P47755 286 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 IDH3AP50213 366 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 CDK6Q00534 326 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 ALG10BQ5I7T1 473 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 LRIF1Q5T3J3 769 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 FAM69AQ5T7M9 428 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 CYB5R2Q6BCY4 276 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 REEP3Q6NUK4 255 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 BLOC1S3Q6QNY0 202 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 C6orf89Q6UWU4 347 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 COMTD1Q86VU5 262 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 FUNDC1Q8IVP5 155 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 C10orf111Q8N326 155 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 MAGEE2Q8TD90 523 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-203ENST00000480744 PIMREGQ9BSJ6 248 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 SPATA5L1Q9BVQ7 753 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms